RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 FOXRED1Q96CU9 486 aaPredicted RBP9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 BARHL1Q9BZE3 327 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 EXOSC3Q9NQT5 275 aaKnown RBP9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 KIF25Q9UIL4 384 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 PLA2G10O15496 165 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 OIP5O43482 229 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 ZNF254O75437 659 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 CDAP32320 146 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 TMPRSS3P57727 454 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 PMP22Q01453 160 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 H3F3CQ6NXT2 135 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 C19orf48Q6RUI8 117 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 PPP1R32Q7Z5V6 425 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 PXKQ7Z7A4 578 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 CCDC71Q8IV32 467 aaPredicted RBP9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 OR4D11Q8NGI4 311 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 PDCD1LG2Q9BQ51 273 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 LIN7BQ9HAP6 207 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 PCDHB10Q9UN67 800 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 ANKRD36A6QL64 1941 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 CBR1P16152 277 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 CAMLGP49069 296 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 UBE2MP61081 183 aaKnown RBP9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 ZFP36L1Q07352 338 aaKnown RBP9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 FAAP20Q6NZ36 180 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 SLC22A25Q6T423 547 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 BPIFB2Q8N4F0 458 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 ZNF565Q8N9K5 539 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 DUSP18Q8NEJ0 188 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 OR5D18Q8NGL1 313 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 PRR7Q8TB68 274 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 C11orf40Q8WZ69 217 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 MEPEQ9NQ76 525 aaPredicted RBP9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 IL20Q9NYY1 176 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 OR52A1Q9UKL2 312 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 B9D1Q9UPM9 204 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 IFNA17P01571 189 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 GUSBP08236 651 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 ZNF44P15621 663 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 ATP1B3P54709 279 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 MTCP1P56278 107 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 TAS2R19P59542 299 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 RAC3P60763 192 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 CNN3Q15417 329 aaKnown RBP9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 PAN3Q58A45 887 aaKnown RBP9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 WDSUB1Q8N9V3 476 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 SLAMF6Q96DU3 332 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 MAN2C1Q9NTJ4 1040 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 PLEKHB1Q9UF11 243 aaPredicted RBP9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 ARRDC5A6NEK1 342 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 E9PI62 339 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 COX6A1P12074 109 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 ZNF16P17020 682 aaPredicted RBP9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 INSL4Q14641 139 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 PCOLCEQ15113 449 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 TIPARPQ7Z3E1 657 aaKnown RBP9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 CLRN3Q8NCR9 226 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 OR51T1Q8NGJ9 327 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 OR8D4Q8NGM9 314 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 OR10R2Q8NGX6 335 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 CA5BP1Q8WTZ4 195 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 CYSLTR2Q9NS75 346 aa9.53□□□□□ -0.88
CARMIL3-202ENST00000559694 A0A0B4J2A0 478 aa9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 IGHV3-64DA0A0J9YX35 117 aa9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 C5orf49A4QMS7 147 aa9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 TMEM212A6NML5 194 aa9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 C9orf172C9J069 976 aa9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 GABARAPH6UMI1 98 aa9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 NTN1O95631 604 aa9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 RAB6AP20340 208 aa9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 ZP3P21754 424 aa9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 HERV-K104P61576 105 aa9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 ADGRG3Q86Y34 549 aa9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 ZCCHC14Q8WYQ9 949 aaKnown RBP9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 DVL3Q92997 716 aaPredicted RBP9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 SLCO5A1Q9H2Y9 848 aa9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 C12orf10Q9HB07 376 aa9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 FGF20Q9NP95 211 aaPredicted RBP9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 SHPKQ9UHJ6 478 aa9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 DIDO1Q9BTC0 2240 aaKnown RBP9.52□□□□□ -0.88
CARMIL3-202ENST00000559694 INTS1Q8N201 2190 aaKnown RBP9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 MED12Q93074 2177 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 FAM90A27PA6NNH2 459 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 FGF9P31371 208 aaPredicted RBP9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 FMODQ06828 376 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 PDZK1IP1Q13113 114 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 SKP2Q13309 424 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 TNK1Q13470 666 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 ALKBH1Q13686 389 aaKnown RBP9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 RNPS1Q15287 305 aaKnown RBP9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 ZNF684Q5T5D7 378 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 CDCP2Q5VXM1 449 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 C17orf47Q8NEP4 570 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 OR2M3Q8NG83 312 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 AKR7LQ8NHP1 331 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 CHAC2Q8WUX2 184 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 LIPHQ8WWY8 451 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 FBXW5Q969U6 566 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 FGGYQ96C11 551 aa9.52□□□□□ -0.89
CARMIL3-202ENST00000559694 FOXB1Q99853 325 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms