RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ZNF704Q6ZNC4 412 aaPredicted RBP14.4□□□□□ -0.1
TPM1-219ENST00000559397 LAX1Q8IWV1 398 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 SKA3Q8IX90 412 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 OR51A4Q8NGJ6 313 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 SH3GL3Q99963 347 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 OR10A4Q9H209 315 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 ABCB9Q9NP78 766 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 ZNF224Q9NZL3 707 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 ANKRD61A6NGH8 418 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 NOTOA8MTQ0 251 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 ACHEP22303 614 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 IL32P24001 234 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 GRB2P62993 217 aaKnown RBP14.39□□□□□ -0.11
TPM1-219ENST00000559397 CCDC92Q53HC0 331 aaPredicted RBP14.39□□□□□ -0.11
TPM1-219ENST00000559397 ELMOD2Q8IZ81 293 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 C17orf78Q8N4C9 275 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 PARP16Q8N5Y8 322 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 WDR31Q8NA23 367 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 STEAP2Q8NFT2 490 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 S100PBPQ96BU1 408 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 FBXO17Q96EF6 278 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 SLC30A2Q9BRI3 323 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 MOB1AQ9H8S9 216 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 NPDC1Q9NQX5 325 aaPredicted RBP14.39□□□□□ -0.11
TPM1-219ENST00000559397 SLC17A5Q9NRA2 495 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 OR5H1A6NKK0 313 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 RGS5O15539 181 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 HOXB1P14653 301 aaPredicted RBP14.39□□□□□ -0.11
TPM1-219ENST00000559397 APEX1P27695 318 aaKnown RBP14.39□□□□□ -0.11
TPM1-219ENST00000559397 SOX2P48431 317 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 PPP3R1P63098 170 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 SPANXN2Q5MJ10 180 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 BCL2L15Q5TBC7 163 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 TMEM244Q5VVB8 128 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 MZT2AQ6P582 158 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 SYT9Q86SS6 491 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 LRRC18Q8N456 261 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 FGFBP3Q8TAT2 258 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 SSC4DQ8WTU2 575 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 ORAI1Q96D31 301 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 LRRC46Q96FV0 321 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 CEP19Q96LK0 163 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 GFI1Q99684 422 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 ACTR6Q9GZN1 396 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 NUFIP1Q9UHK0 495 aaKnown RBP14.39□□□□□ -0.11
TPM1-219ENST00000559397 GTF2A1LQ9UNN4 478 aa14.39□□□□□ -0.11
TPM1-219ENST00000559397 SPTBN1Q01082 2364 aaKnown RBP14.38□□□□□ -0.11
TPM1-219ENST00000559397 DOPEY1Q5JWR5 2465 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 ZNF503-AS2A6NEH8 195 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 PDCD5O14737 125 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 FARS2O95363 451 aaKnown RBP14.38□□□□□ -0.11
TPM1-219ENST00000559397 TTRP02766 147 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 UBCP0CG48 685 aaKnown RBP14.38□□□□□ -0.11
TPM1-219ENST00000559397 EPXP11678 715 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 SORDQ00796 357 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 ODF4Q2M2E3 257 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 TIMM23BQ5SRD1 257 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 IDNKQ5T6J7 187 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 C16orf87Q6PH81 154 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 C22orf34Q6ZV56 151 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 LRRTM1Q86UE6 522 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 TMEM106AQ96A25 262 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 KCNJ15Q99712 375 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 PBOV1Q9GZY1 135 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 HHLA2Q9UM44 414 aa14.38□□□□□ -0.11
TPM1-219ENST00000559397 TENM4Q6N022 2769 aa14.37□□□□□ -0.11
TPM1-219ENST00000559397 TMEM127O75204 238 aa14.37□□□□□ -0.11
TPM1-219ENST00000559397 MMP7P09237 267 aaPredicted RBP14.37□□□□□ -0.11
TPM1-219ENST00000559397 PATE4P0C8F1 98 aa14.37□□□□□ -0.11
TPM1-219ENST00000559397 HSD11B1P28845 292 aa14.37□□□□□ -0.11
TPM1-219ENST00000559397 OTX1P32242 354 aaPredicted RBP14.37□□□□□ -0.11
TPM1-219ENST00000559397 TAF13Q15543 124 aa14.37□□□□□ -0.11
TPM1-219ENST00000559397 RSPO1Q2MKA7 263 aaPredicted RBP14.37□□□□□ -0.11
TPM1-219ENST00000559397 ELFN2Q5R3F8 820 aa14.37□□□□□ -0.11
TPM1-219ENST00000559397 SLC16A14Q7RTX9 510 aa14.37□□□□□ -0.11
TPM1-219ENST00000559397 PRSS45Q7RTY3 260 aa14.37□□□□□ -0.11
TPM1-219ENST00000559397 USB1Q9BQ65 265 aaKnown RBP14.37□□□□□ -0.11
TPM1-219ENST00000559397 WACQ9BTA9 647 aa14.37□□□□□ -0.11
TPM1-219ENST00000559397 B3GNT2Q9NY97 397 aa14.37□□□□□ -0.11
TPM1-219ENST00000559397 COMMD3Q9UBI1 195 aa14.37□□□□□ -0.11
TPM1-219ENST00000559397 AK6Q9Y3D8 172 aaKnown RBP14.37□□□□□ -0.11
TPM1-219ENST00000559397 V9GYH0 126 aa14.37□□□□□ -0.11
TPM1-219ENST00000559397 LOC107986453A0A1B0GWG9 222 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 HLA-HP01893 362 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 ACSM4P0C7M7 580 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 PRKXP51817 358 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 CCDC36Q8IYA8 594 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 TSEN15Q8WW01 171 aaKnown RBP14.36□□□□□ -0.11
TPM1-219ENST00000559397 SOSTQ9BQB4 213 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 SLITRK2Q9H156 845 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 NOX3Q9HBY0 568 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 TCF7L1Q9HCS4 588 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 DAPK2Q9UIK4 370 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 DHDHQ9UQ10 334 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 SLC25A15Q9Y619 301 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 TRAV8-7A0A075B6U6 113 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 A0A1W2PR80 420 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 ZNF32P17041 273 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 ADRA2CP18825 462 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 ATF1P18846 271 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms