RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 GCM1Q9NP62 436 aa9.23□□□□□ -0.93
SPG11-216ENST00000559347 G6PC2Q9NQR9 355 aa9.23□□□□□ -0.93
SPG11-216ENST00000559347 PAPOLBQ9NRJ5 636 aaKnown RBP9.23□□□□□ -0.93
SPG11-216ENST00000559347 ARHGAP32A7KAX9 2087 aa9.23□□□□□ -0.93
SPG11-216ENST00000559347 F5H5P2 479 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 PNPP00491 289 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 HLA-DPB1P04440 258 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 SLC2A1P11166 492 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 ANPEPP15144 967 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 SLC2A5P22732 501 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 THBS2P35442 1172 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 CX3CR1P49238 355 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 SRP9P49458 86 aaKnown RBP9.22□□□□□ -0.93
SPG11-216ENST00000559347 DAPP51397 102 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 BTG1P62324 171 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 GRB2P62993 217 aaKnown RBP9.22□□□□□ -0.93
SPG11-216ENST00000559347 ZNF92Q03936 586 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 ZMYND11Q15326 602 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 TMEM155Q4W5P6 130 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 C1orf146Q5VVC0 180 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 TMEM236Q5W0B7 351 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 SPATC1Q76KD6 591 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 PARP8Q8N3A8 854 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 BBS1Q8NFJ9 593 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 OR5K1Q8NHB7 308 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 ZNF420Q8TAQ5 688 aaPredicted RBP9.22□□□□□ -0.93
SPG11-216ENST00000559347 RNF133Q8WVZ7 376 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 DUS3LQ96G46 650 aaKnown RBP9.22□□□□□ -0.93
SPG11-216ENST00000559347 ADAT1Q9BUB4 502 aaKnown RBP9.22□□□□□ -0.93
SPG11-216ENST00000559347 ABHD6Q9BV23 337 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 OR51V1Q9H2C8 321 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 OPA3Q9H6K4 179 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 CENPMQ9NSP4 180 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 UBAP1Q9NZ09 502 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 WNK2Q9Y3S1 2297 aa9.22□□□□□ -0.93
SPG11-216ENST00000559347 CD300LBA8K4G0 201 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 F5H0A9 414 aaPredicted RBP9.21□□□□□ -0.94
SPG11-216ENST00000559347 TMEM178BH3BS89 294 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 IFNL4K9M1U5 179 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 PHF1O43189 567 aaPredicted RBP9.21□□□□□ -0.94
SPG11-216ENST00000559347 XRCC2O43543 280 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 PLPP2O43688 288 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 SELENOFO60613 162 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 HMGN1P05114 100 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 LYNP07948 512 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 HSD11B1P28845 292 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 OPRL1P41146 370 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 CD200P41217 278 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 NAA10P41227 235 aaPredicted RBP9.21□□□□□ -0.94
SPG11-216ENST00000559347 GATA4P43694 442 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 SLC15A1P46059 708 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 CRISP1P54107 249 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 MAB21L1Q13394 359 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 TAF13Q15543 124 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 ZNF181Q2M3W8 571 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 KLHL12Q53G59 568 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 SLC35D3Q5M8T2 416 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 RHOUQ7L0Q8 258 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 SHFQ7M4L6 423 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 MOGAT3Q86VF5 341 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 CPOQ8IVL8 374 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 SPICQ8N5J4 248 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 OTOSQ8NHW6 89 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 SPRYD4Q8WW59 207 aaPredicted RBP9.21□□□□□ -0.94
SPG11-216ENST00000559347 SPSB4Q96A44 273 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 PLEKHA8Q96JA3 519 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 REPIN1Q9BWE0 567 aaKnown RBP9.21□□□□□ -0.94
SPG11-216ENST00000559347 GABARAPL1Q9H0R8 117 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 TOR3AQ9H497 397 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 KRT84Q9NSB2 600 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 TMEM100Q9NV29 134 aa9.21□□□□□ -0.94
SPG11-216ENST00000559347 DOCK11Q5JSL3 2073 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 IGHV3-64DA0A0J9YX35 117 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 CYB5R3P00387 301 aaPredicted RBP9.2□□□□□ -0.94
SPG11-216ENST00000559347 CA6P23280 308 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 FASP25445 335 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 SRP14P37108 136 aaKnown RBP9.2□□□□□ -0.94
SPG11-216ENST00000559347 MDH2P40926 338 aaKnown RBP9.2□□□□□ -0.94
SPG11-216ENST00000559347 RAD23AP54725 363 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 SEC61A1P61619 476 aaKnown RBP9.2□□□□□ -0.94
SPG11-216ENST00000559347 ESRRGP62508 458 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 APOFQ13790 326 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 PTGES3Q15185 160 aaKnown RBP9.2□□□□□ -0.94
SPG11-216ENST00000559347 OR8G1Q15617 311 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 ASRGL1Q7L266 308 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 PRSS45Q7RTY3 260 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 MUC20Q8N307 709 aaPredicted RBP9.2□□□□□ -0.94
SPG11-216ENST00000559347 KLHL36Q8N4N3 616 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 CELF2-AS1Q8N7Q2 184 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 OR56B2PQ8NGI1 322 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 LRTOMTQ8WZ04 291 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 DVL3Q92997 716 aaPredicted RBP9.2□□□□□ -0.94
SPG11-216ENST00000559347 TEX12Q9BXU0 123 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 TMPRSS13Q9BYE2 586 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 PATZ1Q9HBE1 687 aaKnown RBP9.2□□□□□ -0.94
SPG11-216ENST00000559347 DNAJC27Q9NZQ0 273 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 MRPL15Q9P015 296 aaKnown RBP9.2□□□□□ -0.94
SPG11-216ENST00000559347 KLHDC2Q9Y2U9 406 aa9.2□□□□□ -0.94
SPG11-216ENST00000559347 NOP16Q9Y3C1 178 aaKnown RBP9.2□□□□□ -0.94
SPG11-216ENST00000559347 STAB1Q9NY15 2570 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms