RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ANXA2P07355 339 aaKnown RBP9.29□□□□□ -0.92
TPM1-217ENST00000559108 HTR1AP08908 422 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 PAX1P15863 534 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 KITLGP21583 273 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 ACKR3P25106 362 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 MAGEB1P43366 347 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 PTH2RP49190 550 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 KLF3P57682 345 aaPredicted RBP9.29□□□□□ -0.92
TPM1-217ENST00000559108 RAB40BQ12829 278 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 OR2G6Q5TZ20 316 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 LIPNQ5VXI9 398 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 OR2T2Q6IF00 324 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 TGIF2LYQ8IUE0 185 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 ACBD7Q8N6N7 88 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 BHLHE23Q8NDY6 225 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 ASB17Q8WXJ9 295 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 DVL3Q92997 716 aaPredicted RBP9.29□□□□□ -0.92
TPM1-217ENST00000559108 SPSB4Q96A44 273 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 HAVCR1Q96D42 359 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 MBD6Q96DN6 1003 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 PELI1Q96FA3 418 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 PERPQ96FX8 193 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 MNTQ99583 582 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 ALG8Q9BVK2 526 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 JAM3Q9BX67 310 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 FGF23Q9GZV9 251 aaPredicted RBP9.29□□□□□ -0.92
TPM1-217ENST00000559108 VCX3BQ9H321 246 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 TAAR3PQ9P1P4 343 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 PURGQ9UJV8 347 aaKnown RBP9.29□□□□□ -0.92
TPM1-217ENST00000559108 RAB26Q9ULW5 256 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 RPL36Q9Y3U8 105 aaKnown RBP9.29□□□□□ -0.92
TPM1-217ENST00000559108 SPEF1Q9Y4P9 236 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 SIRT4Q9Y6E7 314 aaPredicted RBP9.29□□□□□ -0.92
TPM1-217ENST00000559108 TMEM14AQ9Y6G1 99 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 CR1P17927 2039 aa9.29□□□□□ -0.92
TPM1-217ENST00000559108 A0A1B0GTI1 187 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 TMEM269A0A1B0GVZ9 245 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 A0A1W2PPW3 197 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 DAPL1A0PJW8 107 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 METTL15A6NJ78 407 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 H0YL77 283 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 H7C417 338 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 J3QW42 95 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 MLNRO43193 412 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 TBX1O43435 398 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 ZNF254O75437 659 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 SELEP16581 610 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 DCTDP32321 178 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 ATP6V1E1P36543 226 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 RGS6P49758 472 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 PPOXP50336 477 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 MMP16P51512 607 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 GTF2A1P52655 376 aaPredicted RBP9.28□□□□□ -0.92
TPM1-217ENST00000559108 RIDAP52758 137 aaKnown RBP9.28□□□□□ -0.92
TPM1-217ENST00000559108 RPS23P62266 143 aaKnown RBP9.28□□□□□ -0.92
TPM1-217ENST00000559108 ACTC1P68032 377 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 ACTA1P68133 377 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 FAM3AP98173 230 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 GALEQ14376 348 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 TESK1Q15569 626 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 GFOD2Q3B7J2 385 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 ZNF718Q3SXZ3 478 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 WDR38Q5JTN6 314 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 KCTD18Q6PI47 426 aaPredicted RBP9.28□□□□□ -0.92
TPM1-217ENST00000559108 DEGS2Q6QHC5 323 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 CATSPERDQ86XM0 798 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 YIPF7Q8N8F6 280 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 NINJ1Q92982 152 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 REEP6Q96HR9 211 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 C4orf36Q96KX1 117 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 REPIN1Q9BWE0 567 aaKnown RBP9.28□□□□□ -0.92
TPM1-217ENST00000559108 MROQ9BYG7 248 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 PBOV1Q9GZY1 135 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 ERVK-18Q9QC07 812 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 NUFIP1Q9UHK0 495 aaKnown RBP9.28□□□□□ -0.92
TPM1-217ENST00000559108 GNG8Q9UK08 70 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 DIMT1Q9UNQ2 313 aaKnown RBP9.28□□□□□ -0.92
TPM1-217ENST00000559108 R4GMQ9 66 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 VPS13CQ709C8 3753 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 ITPR3Q14573 2671 aa9.28□□□□□ -0.92
TPM1-217ENST00000559108 A0A1B0GWJ7 208 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 IQCF6A8MYZ5 107 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 LYNX1G3V0Z9 82 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 H3BSA7 217 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 H3BSH0 61 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 J3QLW9 94 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 M0R233 179 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 PHYHO14832 338 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 DENRO43583 198 aaKnown RBP9.27□□□□□ -0.93
TPM1-217ENST00000559108 IGHV1-46P01743 117 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 HPXP02790 462 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 HLA-DPB1P04440 258 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 KRT8P05787 483 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 LYNX1P0DP58 116 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 PIPP12273 146 aaPredicted RBP9.27□□□□□ -0.93
TPM1-217ENST00000559108 RAC2P15153 192 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 ZNF19P17023 458 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 CRHBPP24387 322 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 DNASE1P24855 282 aa9.27□□□□□ -0.93
TPM1-217ENST00000559108 HSPA13P48723 471 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms