RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 ZNF841Q6ZN19 808 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 CELF2-AS1Q8N7Q2 184 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 C19orf18Q8NEA5 215 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 OR9Q2Q8NGE9 314 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 OR51L1Q8NGJ5 315 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 OR4C15Q8NGM1 316 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 OR8D4Q8NGM9 314 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 Q8TCH9 128 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 ERGIC1Q969X5 290 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 NEIL1Q96FI4 390 aaPredicted RBP9.61□□□□□ -0.87
CASC4-205ENST00000558735 TRIM15Q9C019 465 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 OR5V1Q9UGF6 321 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 KCNG2Q9UJ96 466 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 ZNF281Q9Y2X9 895 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 ARL2BPQ9Y2Y0 163 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 CDH10Q9Y6N8 788 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 DOCK11Q5JSL3 2073 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 IGHV3OR16-10A0A075B7F0 116 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 IGHV2-70DA0A0C4DH43 119 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 POM121CA8CG34 1229 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 M0R135 149 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 TNFRSF13BO14836 293 aaPredicted RBP9.6□□□□□ -0.87
CASC4-205ENST00000558735 FAM20BO75063 409 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 CA6P23280 308 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 CD200P41217 278 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 BAMBIQ13145 260 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 MIDNQ504T8 468 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 PRAMEF6Q5VXH4 476 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 WDR25Q64LD2 544 aaPredicted RBP9.6□□□□□ -0.87
CASC4-205ENST00000558735 C16orf89Q6UX73 402 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 LRRN1Q6UXK5 716 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 RASSF6Q6ZTQ3 369 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 C1orf87Q8N0U7 546 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 LNX2Q8N448 690 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 ZNF511Q8NB15 262 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 SLC37A3Q8NCC5 494 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 OR2T4Q8NH00 348 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 SPRYD4Q8WW59 207 aaPredicted RBP9.6□□□□□ -0.87
CASC4-205ENST00000558735 UPRTQ96BW1 309 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 ZNF799Q96GE5 643 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 PLEKHA8Q96JA3 519 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 MS4A7Q9GZW8 240 aaPredicted RBP9.6□□□□□ -0.87
CASC4-205ENST00000558735 ZMAT3Q9HA38 289 aaKnown RBP9.6□□□□□ -0.87
CASC4-205ENST00000558735 UFSP2Q9NUQ7 469 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 ACTR3BQ9P1U1 418 aa9.6□□□□□ -0.87
CASC4-205ENST00000558735 TCRBV5S2A0A599 114 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 DNAJC9-AS1A6NH13 148 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 ZNF593O00488 134 aaPredicted RBP9.59□□□□□ -0.87
CASC4-205ENST00000558735 PTBP3O95758 552 aaKnown RBP9.59□□□□□ -0.87
CASC4-205ENST00000558735 PLATP00750 562 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 IRF2P14316 349 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 ATP6V1B2P21281 511 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 PSMB10P40306 273 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 MAGEA2P43356 314 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 PITPNBP48739 271 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 GNGT1P63211 74 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 MS4A2Q01362 244 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 PCK2Q16822 640 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 RPL13AP3Q6NVV1 102 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 BTNL3Q6UXE8 466 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 DCDC5Q6ZRR9 648 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 C9orf139Q6ZV77 190 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 MRPL21Q7Z2W9 205 aaKnown RBP9.59□□□□□ -0.87
CASC4-205ENST00000558735 DCXRQ7Z4W1 244 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 PARP8Q8N3A8 854 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 LINC00471Q8N535 108 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 FITM2Q8N6M3 262 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 PROKR2Q8NFJ6 384 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 OR8B3Q8NGG8 313 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 OR52L1Q8NGH7 329 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 OR9Q1Q8NGQ5 310 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 OR11L1Q8NGX0 322 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 OR4Q3Q8NH05 313 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 OR2AE1Q8NHA4 323 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 SPTSSAQ969W0 71 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 OR8B2Q96RD0 313 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 NUDT16L1Q9BRJ7 211 aaKnown RBP9.59□□□□□ -0.87
CASC4-205ENST00000558735 TSSK6Q9BXA6 273 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 NMNAT2Q9BZQ4 307 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 SLC22A4Q9H015 551 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 SLITRK2Q9H156 845 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 VNN3Q9NY84 501 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 RNF7Q9UBF6 113 aa9.59□□□□□ -0.87
CASC4-205ENST00000558735 GGT3PA6NGU5 568 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 B2RBV5 119 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 GMDSO60547 372 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 CCNB2O95067 398 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 GYPBP06028 91 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 CLUP10909 449 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 SLC2A1P11166 492 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 FMO3P31513 532 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 PRKXP51817 358 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 MXRA7P84157 204 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 CRMP1Q14194 572 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 SLC9A3R2Q15599 337 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 OR8G1Q15617 311 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 MICAQ29983 383 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 TEX30Q5JUR7 227 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 GLYATL3Q5SZD4 288 aa9.58□□□□□ -0.88
CASC4-205ENST00000558735 SFRP4Q6FHJ7 346 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms