RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 SEC61A2Q9H9S3 476 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 HPF1Q9NWY4 346 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 SLC39A1Q9NY26 324 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 ZMAT5Q9UDW3 170 aaKnown RBP7.37□□□□□ -1.23
SPG11-209ENST00000558253 SLC23A1Q9UHI7 598 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 ATPIF1Q9UII2 106 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 KIF25Q9UIL4 384 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 ZNF391Q9UJN7 358 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 FBXL2Q9UKC9 423 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 FLVCR2Q9UPI3 526 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 PTRH2Q9Y3E5 179 aaKnown RBP7.37□□□□□ -1.23
SPG11-209ENST00000558253 RHBDD3Q9Y3P4 386 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 PCDHGA5Q9Y5G8 931 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 FLVCR1Q9Y5Y0 555 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 LHFPL6Q9Y693 200 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 ADAMTS20P59510 1910 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 A0A087WV48 116 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 A0A1B0GTI1 187 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 A0A1B0GW55 424 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 TMEM82A0PJX8 343 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 TMEM14DPA8MWL7 114 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 NPIPA2E9PIF3 369 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 F5H5P2 479 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 NPIPA3F8WFD2 350 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 SMLR1H3BR10 107 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 L7N2F9 121 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 CA11O75493 328 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 KLF7O75840 302 aaPredicted RBP7.36□□□□□ -1.23
SPG11-209ENST00000558253 HPP00738 406 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 CD3DP04234 171 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 UMODP07911 640 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 DUX4L2P0CJ85 424 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 DUX4L3P0CJ86 424 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 DUX4L4P0CJ87 422 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 DUX4L5P0CJ88 424 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 DUX4L6P0CJ89 424 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 DUX4L7P0CJ90 424 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 TMIGD3P0DMS9 266 aaPredicted RBP7.36□□□□□ -1.23
SPG11-209ENST00000558253 ANXA7P20073 488 aaKnown RBP7.36□□□□□ -1.23
SPG11-209ENST00000558253 SRD5A2P31213 254 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 THBS4P35443 961 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 ZNF93P35789 620 aaPredicted RBP7.36□□□□□ -1.23
SPG11-209ENST00000558253 CSNK1A1P48729 337 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 SELENOPP49908 381 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 ZNF81P51508 661 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 TSPAN5P62079 268 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 SNRPD2P62316 118 aaKnown RBP7.36□□□□□ -1.23
SPG11-209ENST00000558253 HIST1H3AP68431 136 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 QRFPP83859 136 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 ZXDAP98168 799 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 SSPNQ14714 243 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 STK11Q15831 433 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 GRK1Q15835 563 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 ZNF260Q3ZCT1 412 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 RNASE10Q5GAN6 216 aaKnown RBP7.36□□□□□ -1.23
SPG11-209ENST00000558253 DCAF12Q5T6F0 453 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 HIST2H3PS2Q5TEC6 136 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 STPG1Q5TH74 334 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 NSUN5P2Q63ZY6 315 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 H3F3CQ6NXT2 135 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 JMJD6Q6NYC1 403 aaPredicted RBP7.36□□□□□ -1.23
SPG11-209ENST00000558253 TMEM65Q6PI78 240 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 TSSK4Q6SA08 328 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 HIST2H3AQ71DI3 136 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 UTS2BQ765I0 119 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 MDGA2Q7Z553 956 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 GPAT4Q86UL3 456 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 C1orf210Q8IVY1 113 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 NAXDQ8IW45 347 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 FTMTQ8N4E7 242 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 OR11H4Q8NGC9 324 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 OR56B1Q8NGI3 324 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 OR52H1Q8NGJ2 320 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 OR1J2Q8NGS2 313 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 OR10R2Q8NGX6 335 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 SPTSSAQ969W0 71 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 SFXN2Q96NB2 322 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 FOXN4Q96NZ1 517 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 SEC22CQ9BRL7 303 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 DDA1Q9BW61 102 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 GSX2Q9BZM3 304 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 CST11Q9H112 138 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 HEXA-AS1Q9H8Q6 139 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 CNTD2Q9H8S5 307 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.36□□□□□ -1.23
SPG11-209ENST00000558253 ZC4H2Q9NQZ6 224 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 MED9Q9NWA0 146 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 PIPOXQ9P0Z9 390 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 DUX4Q9UBX2 424 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 DKKL1Q9UK85 242 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 PADI1Q9ULC6 663 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 HS3ST3B1Q9Y662 390 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 SPAG17Q6Q759 2223 aa7.36□□□□□ -1.23
SPG11-209ENST00000558253 PCDH15Q96QU1 1955 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 REV3LO60673 3130 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 IGKV1D-43A0A0B4J1Z2 117 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 A0A0D9SG52 128 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 FAM25EA8MYX2 175 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 MCRIP1C9JLW8 97 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 RAB27BO00194 218 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms