RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 GMDSO60547 372 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 CST1P01037 141 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 ZNF3P17036 446 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 EPHA1P21709 976 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 DDOSTP39656 456 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 ENTPD1P49961 510 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 MZT1Q08AG7 82 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 SPRNQ5BIV9 151 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 NKAPLQ5M9Q1 402 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 OTPQ5XKR4 325 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 PGAP1Q75T13 922 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 TRPM8Q7Z2W7 1104 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 C1QL2Q7Z5L3 287 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.51□□□□□ -1.05
USP3-207ENST00000558218 LINC00346Q8IVM7 164 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 SPERTQ8NA61 448 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 CYB561A3Q8NBI2 242 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 OR10G2Q8NGC3 310 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 OR8D4Q8NGM9 314 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 ZNF418Q8TF45 676 aaPredicted RBP8.51□□□□□ -1.05
USP3-207ENST00000558218 GIPC3Q8TF64 312 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 ZNF799Q96GE5 643 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 MEGF10Q96KG7 1140 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 KCNJ15Q99712 375 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 THTPAQ9BU02 230 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 C19orf24Q9BVV8 132 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 TMPRSS13Q9BYE2 586 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 PLA2G12AQ9BZM1 189 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 TOR3AQ9H497 397 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 OPA3Q9H6K4 179 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 C7orf69Q9H7B7 122 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 CMC2Q9NRP2 79 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 MIOXQ9UGB7 285 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 U3KQV3 271 aa8.51□□□□□ -1.05
USP3-207ENST00000558218 GNGT2O14610 69 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 GYG2O15488 501 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 PTBP3O95758 552 aaKnown RBP8.5□□□□□ -1.05
USP3-207ENST00000558218 HMGN1P05114 100 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 WNT2P09544 360 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 PPIAL4GP0DN37 164 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 ANXA8P13928 327 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 ADRA2CP18825 462 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 PAICSP22234 425 aaKnown RBP8.5□□□□□ -1.05
USP3-207ENST00000558218 FPR2P25090 351 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 PYCR1P32322 319 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 GRK5P34947 590 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 CD200P41217 278 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 GRB2P62993 217 aaKnown RBP8.5□□□□□ -1.05
USP3-207ENST00000558218 CRMP1Q14194 572 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 ZMYND11Q15326 602 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 SHFQ7M4L6 423 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 MRPL21Q7Z2W9 205 aaKnown RBP8.5□□□□□ -1.05
USP3-207ENST00000558218 DCXRQ7Z4W1 244 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 NAA40Q86UY6 237 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 ADGRG5Q8IZF4 528 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 OR5AS1Q8N127 324 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 OR10S1Q8NGN2 331 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 OR4Q3Q8NH05 313 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 TEX47Q8TBZ9 253 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 Q8TCH9 128 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 CANT1Q8WVQ1 401 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 SPRYD4Q8WW59 207 aaPredicted RBP8.5□□□□□ -1.05
USP3-207ENST00000558218 ITFG2Q969R8 447 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 SLCO4A1Q96BD0 722 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 NRBF2Q96F24 287 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 FEVQ99581 238 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 FN3KQ9H479 309 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 MARCH7Q9H992 704 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 TMEM165Q9HC07 324 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 UBAP1Q9NZ09 502 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 MRPL15Q9P015 296 aaKnown RBP8.5□□□□□ -1.05
USP3-207ENST00000558218 LRCH1Q9Y2L9 728 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 COMMD3-BMI1R4GMX3 469 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 DOCK11Q5JSL3 2073 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 STAB1Q9NY15 2570 aa8.5□□□□□ -1.05
USP3-207ENST00000558218 DHRS12A0PJE2 317 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 CD300LBA8K4G0 201 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 ZNF878C9JN71 531 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 F5H0A9 414 aaPredicted RBP8.49□□□□□ -1.05
USP3-207ENST00000558218 MLNRO43193 412 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 XRCC2O43543 280 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 IRF2P14316 349 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 SPI1P17947 270 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 CFL1P23528 166 aaKnown RBP8.49□□□□□ -1.05
USP3-207ENST00000558218 ERFP50548 548 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 RAD23AP54725 363 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 PPP1R8Q12972 351 aaKnown RBP8.49□□□□□ -1.05
USP3-207ENST00000558218 MAB21L1Q13394 359 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 TAF13Q15543 124 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 SNCBQ16143 134 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 ESCO2Q56NI9 601 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 XP32Q5T750 250 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 LINC01590Q5TEZ4 76 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 PAPD5Q8NDF8 572 aaKnown RBP8.49□□□□□ -1.05
USP3-207ENST00000558218 OR11L1Q8NGX0 322 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 BCAS4Q8TDM0 211 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 ZNRF4Q8WWF5 429 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 DNAJC9Q8WXX5 260 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 SPSB4Q96A44 273 aa8.49□□□□□ -1.05
USP3-207ENST00000558218 SLAMF6Q96DU3 332 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms