RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ZBTB37Q5TC79 503 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 WFDC8Q8IUA0 241 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 ZNF584Q8IVC4 421 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 FAM222BQ8WU58 562 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 YIPF6Q96EC8 236 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 ABCB9Q9NP78 766 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 BRD7Q9NPI1 651 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 CKLFQ9UBR5 152 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 DHDHQ9UQ10 334 aa10.75□□□□□ -0.69
TPM1-209ENST00000558072 NOP16Q9Y3C1 178 aaKnown RBP10.75□□□□□ -0.69
TPM1-209ENST00000558072 HIVEP3Q5T1R4 2406 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 IGHV1-18A0A0C4DH31 117 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 A1L4Q6 167 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 ZNF503-AS2A6NEH8 195 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 E9PI62 339 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 AIREO43918 545 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 PNPP00491 289 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 LALBAP00709 142 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 TTRP02766 147 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 DBHP09172 617 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 ZNF35P13682 527 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 CCL1P22362 96 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 CD40P25942 277 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 FGF9P31371 208 aaPredicted RBP10.74□□□□□ -0.69
TPM1-209ENST00000558072 KIR2DL3P43628 341 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 MAP2K3P46734 347 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 PSMD7P51665 324 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 TFF3Q07654 80 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 ZNF718Q3SXZ3 478 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 Q499Y3 187 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 CD200R1LQ6Q8B3 271 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 PRSS45Q7RTY3 260 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 MRPL21Q7Z2W9 205 aaKnown RBP10.74□□□□□ -0.69
TPM1-209ENST00000558072 PRSS35Q8N3Z0 413 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 CSNK2A3Q8NEV1 391 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 OR8B12Q8NGG6 310 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 ABHD4Q8TB40 342 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 SSC4DQ8WTU2 575 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 TSEN15Q8WW01 171 aaKnown RBP10.74□□□□□ -0.69
TPM1-209ENST00000558072 SPSB4Q96A44 273 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 DGCR14Q96DF8 476 aaKnown RBP10.74□□□□□ -0.69
TPM1-209ENST00000558072 PGLYRP3Q96LB9 341 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 WFIKKN1Q96NZ8 548 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 TECTBQ96PL2 329 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 TMED9Q9BVK6 235 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 FUNDC2Q9BWH2 189 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 PLEKHA1Q9HB21 404 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 NOX3Q9HBY0 568 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 GPR160Q9UJ42 338 aa10.74□□□□□ -0.69
TPM1-209ENST00000558072 FBXO9Q9UK97 447 aaPredicted RBP10.74□□□□□ -0.69
TPM1-209ENST00000558072 IGHV2OR16-5A0A0B4J2B6 119 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 PNMA8CA0A1B0GUJ8 204 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 CCDC160A6NGH7 325 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 SLC22A1O15245 554 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 TMEM127O75204 238 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 DHRS3O75911 302 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 CD3EP07766 207 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 OCM2P0CE71 109 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 RAC2P15153 192 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 MYL9P24844 172 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 GCH1P30793 250 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 NANOS3P60323 173 aaKnown RBP10.73□□□□□ -0.69
TPM1-209ENST00000558072 MFGE8Q08431 387 aaPredicted RBP10.73□□□□□ -0.69
TPM1-209ENST00000558072 RIPPLY1Q0D2K3 151 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 SSX1Q16384 188 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 ACSM3Q53FZ2 586 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 GPR107Q5VW38 600 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 ALKBH2Q6NS38 261 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 Q6ZSR3 168 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 C22orf34Q6ZV56 151 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 PGAP1Q75T13 922 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 SATL1Q86VE3 508 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 CLVS1Q8IUQ0 354 aaPredicted RBP10.73□□□□□ -0.69
TPM1-209ENST00000558072 NUP37Q8NFH4 326 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 OR5D14Q8NGL3 314 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 PP6455Q8WZ26 134 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 SLC7A6Q92536 515 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 CPNE2Q96FN4 548 aaPredicted RBP10.73□□□□□ -0.69
TPM1-209ENST00000558072 MS4A3Q96HJ5 214 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 REEP6Q96HR9 211 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 KCTD7Q96MP8 289 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 PDCD1LG2Q9BQ51 273 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 C1QTNF6Q9BXI9 259 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 EXOSC4Q9NPD3 245 aaKnown RBP10.73□□□□□ -0.69
TPM1-209ENST00000558072 NPDC1Q9NQX5 325 aaPredicted RBP10.73□□□□□ -0.69
TPM1-209ENST00000558072 SF3B6Q9Y3B4 125 aaKnown RBP10.73□□□□□ -0.69
TPM1-209ENST00000558072 N6AMT1Q9Y5N5 214 aa10.73□□□□□ -0.69
TPM1-209ENST00000558072 TRBV5-5A0A0J9YX44 114 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 LOC107986453A0A1B0GWG9 222 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 MEGF11A6BM72 1044 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 PDCD5O14737 125 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 SMPD2O60906 423 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 GABARAPO95166 117 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 IGLV3-1P01715 115 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 ERCC1P07992 297 aaPredicted RBP10.72□□□□□ -0.69
TPM1-209ENST00000558072 SLC2A1P11166 492 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 ZNF20P17024 532 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 NR4A1P22736 598 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 GLRXP35754 106 aa10.72□□□□□ -0.69
TPM1-209ENST00000558072 GNALP38405 381 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms