RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 APOBEC1P41238 236 aaKnown RBP11.42□□□□□ -0.58
LDLR-207ENST00000558013 TAGLNQ01995 201 aaKnown RBP11.42□□□□□ -0.58
LDLR-207ENST00000558013 ZP4Q12836 540 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 TOMM20Q15388 145 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 PRAMEF20Q5VT98 475 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 C11orf87Q6NUJ2 197 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 ST8SIA1Q92185 356 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 MRPL13Q9BYD1 178 aaKnown RBP11.42□□□□□ -0.58
LDLR-207ENST00000558013 TNFSF18Q9UNG2 199 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 EML6Q6ZMW3 1958 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 RAD51DO75771 328 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 MPIG6BO95866 241 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 CD8AP01732 235 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 NAGAP17050 411 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 CLVS2Q5SYC1 327 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 DNM1P34Q6PK57 102 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 KLHL24Q6TFL4 600 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 GLIPR1L1Q6UWM5 242 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 SLC25A42Q86VD7 318 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 WNT2BQ93097 391 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 DDIT4LQ96D03 193 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 PPP4R1LQ9P1A2 415 aa11.42□□□□□ -0.58
LDLR-207ENST00000558013 RPH3AQ9Y2J0 694 aaPredicted RBP11.42□□□□□ -0.58
LDLR-207ENST00000558013 MPTX1A8MV57 137 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 DISC1C4P0D8 188 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 CELA2AP08217 269 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 LAP3P28838 519 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 NPY4RP50391 375 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 EMP2P54851 167 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 LYG2Q86SG7 212 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 SLC22A24Q8N4F4 322 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 IFT46Q9NQC8 304 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 GPR84Q9NQS5 396 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 SESN1Q9Y6P5 492 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 MASP2O00187 686 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 EFSO43281 561 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 MBTPS2O43462 519 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 RAB3AP20336 220 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 DLSTP36957 453 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 PTGDSP41222 190 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 ZNF121P58317 390 aaPredicted RBP11.41□□□□□ -0.58
LDLR-207ENST00000558013 CLRN1P58418 232 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 SMAD4Q13485 552 aaKnown RBP11.41□□□□□ -0.58
LDLR-207ENST00000558013 PLPPR5Q32ZL2 321 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 RHBDD2Q6NTF9 364 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 OVCH2Q7RTZ1 564 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 C1QL2Q7Z5L3 287 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 OR5AS1Q8N127 324 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 NKAIN3Q8N8D7 197 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 PXT1Q8NFP0 134 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 OR8B12Q8NGG6 310 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 LIN37Q96GY3 246 aaPredicted RBP11.41□□□□□ -0.58
LDLR-207ENST00000558013 TMEM41AQ96HV5 264 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 SLCO5A1Q9H2Y9 848 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 METTL7AQ9H8H3 244 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 MBD2Q9UBB5 411 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 PI4KAP42356 2102 aa11.41□□□□□ -0.58
LDLR-207ENST00000558013 BCAT2O15382 392 aaPredicted RBP11.4□□□□□ -0.58
LDLR-207ENST00000558013 MGMTP16455 207 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 HSD11B1P28845 292 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 TMEM50BP56557 158 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 MICBQ29980 383 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 GUSBP11Q6P575 273 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 HDDC2Q7Z4H3 204 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 CADM4Q8NFZ8 388 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 OR5D14Q8NGL3 314 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 OR10R2Q8NGX6 335 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 LPAR5Q9H1C0 372 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 BARX1Q9HBU1 254 aaPredicted RBP11.4□□□□□ -0.58
LDLR-207ENST00000558013 KLHL13Q9P2N7 655 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 GPN3Q9UHW5 284 aaPredicted RBP11.4□□□□□ -0.58
LDLR-207ENST00000558013 P2RY4P51582 365 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 ZNF41P51814 821 aaPredicted RBP11.4□□□□□ -0.58
LDLR-207ENST00000558013 PRSS12P56730 875 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 SHBQ15464 509 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 TMEM176BQ3YBM2 270 aaPredicted RBP11.4□□□□□ -0.58
LDLR-207ENST00000558013 DEGS2Q6QHC5 323 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 FAM57BQ71RH2 274 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 KCNRGQ8N5I3 272 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 C1orf147Q96MC9 270 aaPredicted RBP11.4□□□□□ -0.58
LDLR-207ENST00000558013 PRRT1Q99946 306 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 MED9Q9NWA0 146 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 RASL12Q9NYN1 266 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 B3GALT5Q9Y2C3 310 aa11.4□□□□□ -0.58
LDLR-207ENST00000558013 COL5A1P20908 1838 aaPredicted RBP11.4□□□□□ -0.59
LDLR-207ENST00000558013 G3V3Y1 287 aa11.4□□□□□ -0.59
LDLR-207ENST00000558013 TRAF3IP2O43734 574 aaPredicted RBP11.4□□□□□ -0.59
LDLR-207ENST00000558013 ADAP1O75689 374 aa11.4□□□□□ -0.59
LDLR-207ENST00000558013 SCRG1O75711 98 aa11.4□□□□□ -0.59
LDLR-207ENST00000558013 PGA4P0DJD7 388 aa11.4□□□□□ -0.59
LDLR-207ENST00000558013 PGA3P0DJD8 388 aa11.4□□□□□ -0.59
LDLR-207ENST00000558013 STARP49675 285 aa11.4□□□□□ -0.59
LDLR-207ENST00000558013 OR4K15Q8NH41 348 aa11.4□□□□□ -0.59
LDLR-207ENST00000558013 MITD1Q8WV92 249 aa11.4□□□□□ -0.59
LDLR-207ENST00000558013 NARS2Q96I59 477 aaKnown RBP11.4□□□□□ -0.59
LDLR-207ENST00000558013 ZNF768Q9H5H4 540 aaKnown RBP11.4□□□□□ -0.59
LDLR-207ENST00000558013 C12orf4Q9NQ89 552 aa11.4□□□□□ -0.59
LDLR-207ENST00000558013 ALKBH4Q9NXW9 302 aa11.4□□□□□ -0.59
LDLR-207ENST00000558013 COMMD9Q9P000 198 aa11.4□□□□□ -0.59
LDLR-207ENST00000558013 IGHV3-15A0A0B4J1V0 119 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms