RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 AQP10Q96PS8 301 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 CMSS1Q9BQ75 279 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 HRH4Q9H3N8 390 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 CERS4Q9HA82 394 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 OR2S2Q9NQN1 319 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 RCC2Q9P258 522 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 NPIPA1Q9UND3 350 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 GPR132Q9UNW8 380 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 WIF1Q9Y5W5 379 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 FLVCR1Q9Y5Y0 555 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 SPTY2D1-AS1A0A0U1RR47 76 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 MSGN1A6NI15 193 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 TMEM14DPA8MWL7 114 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 FARS2O95363 451 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 TTRP02766 147 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 GSTP1P09211 210 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 CTHP32929 405 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 PPM1FP49593 454 aaPredicted RBP10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 CAV2P51636 162 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 EBPQ15125 230 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 SLC9A3R2Q15599 337 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 VAX1Q5SQQ9 334 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 EIF5AL1Q6IS14 154 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 COX15Q7KZN9 410 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 ANGPTL5Q86XS5 388 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 OR13C9Q8NGT0 318 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 GPR119Q8TDV5 335 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 ADAMTS17Q8TE56 1095 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 ASB10Q8WXI3 467 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 ROBO4Q8WZ75 1007 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 ADAT3Q96EY9 351 aaPredicted RBP10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 SMIM8Q96KF7 97 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 MICU1Q9BPX6 476 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 PDE7BQ9NP56 450 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 ACKR4Q9NPB9 350 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 FAM206AQ9NX38 181 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 FAM96BQ9Y3D0 163 aa10.52□□□□□ -0.73
VIPAS39-211ENST00000557658 MBTPS2O43462 519 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 ADAP1O75689 374 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 PET100P0DJ07 73 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 MUC1P15941 1255 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 ABCD3P28288 659 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 ZNF93P35789 620 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 CAPZBP47756 277 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 KCNJ3P48549 501 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 NPY4RP50391 375 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 DAP3P51398 398 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 FZD2Q14332 565 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 ELAVL1Q15717 326 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 CLEC18BQ6UXF7 455 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 OR10H5Q8NGA6 315 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 C2CD4CQ8TF44 421 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 SFT2D1Q8WV19 159 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 TMEM230Q96A57 120 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 CPNE2Q96FN4 548 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 NICN1Q9BSH3 213 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 PBOV1Q9GZY1 135 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 C5orf66Q9H5L9 145 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 OR5AC2Q9NZP5 309 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 DNAJB11Q9UBS4 358 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 ANAPC10Q9UM13 185 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 DNAH14Q0VDD8 3507 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 MEX3AA1L020 520 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 CEACAM18A8MTB9 384 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 FTCDNL1E5RQL4 147 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 TO15178 435 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 THEGLP0DJG4 465 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 NFYBP25208 207 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 CLDN6P56747 220 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 PEA15Q15121 130 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 SWI5Q1ZZU3 235 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 PTCRAQ6ISU1 281 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 C9orf40Q8IXQ3 194 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 OR2I1PQ8NGU4 316 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 SLAMF6Q96DU3 332 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 ZC3H10Q96K80 434 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 LPAR5Q9H1C0 372 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 THADAQ6YHU6 1953 aa10.51□□□□□ -0.73
VIPAS39-211ENST00000557658 IGKV3D-11A0A0A0MRZ8 115 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 MS4A18H0YCH9 400 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 RNASEK-C17orf49H0YIS7 233 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 CSTBP04080 98 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 ZNF20P17024 532 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 IL11P20809 199 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 FPR2P25090 351 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 ZP4Q12836 540 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 MS4A18Q3C1V0 323 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 TMEM92Q6UXU6 159 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 RTN4RL2Q86UN3 420 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 NAA40Q86UY6 237 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 RAB3CQ96E17 227 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 TMEM41AQ96HV5 264 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 C2orf50Q96LR7 162 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 KCNK17Q96T54 332 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 METTL8Q9H825 291 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 RP1P56715 2156 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 TCRBV21S2A2A0A5A6 115 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 TAAR5O14804 337 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 ZNF217O75362 1048 aa10.5□□□□□ -0.73
VIPAS39-211ENST00000557658 MPIG6BO95866 241 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms