RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 YIPF3Q9GZM5 350 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 OPA3Q9H6K4 179 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 ZNF275Q9NSD4 429 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-211ENST00000557623 LAMP5Q9UJQ1 280 aa10.62□□□□□ -0.71
SLIRP-211ENST00000557623 MAP1AP78559 2803 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-211ENST00000557623 IGHV4-61A0A0C4DH41 118 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 FAM181BA6NEQ2 426 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 CCDC182A6NF36 153 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 EI24O14681 340 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 PPIHO43447 177 aaKnown RBP10.61□□□□□ -0.71
SLIRP-211ENST00000557623 XRCC2O43543 280 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 CDC14BO60729 498 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 RP2O75695 350 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 ANXA2P07355 339 aaKnown RBP10.61□□□□□ -0.71
SLIRP-211ENST00000557623 OPRL1P41146 370 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 NAA10P41227 235 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-211ENST00000557623 CX3CR1P49238 355 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 GZMKP49863 264 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 CDC42P60953 191 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 SLC3A1Q07837 685 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 GK2Q14410 553 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-211ENST00000557623 SNAI3Q3KNW1 292 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 ARSJQ5FYB0 599 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-211ENST00000557623 AADACL4Q5VUY2 407 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 CYB5R2Q6BCY4 276 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 KCTD18Q6PI47 426 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-211ENST00000557623 Q71RC1 249 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-211ENST00000557623 OR5AS1Q8N127 324 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 PQLC1Q8N2U9 271 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 MNTQ99583 582 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 NIPAL2Q9H841 368 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 TMEM100Q9NV29 134 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 IL19Q9UHD0 177 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 NOP16Q9Y3C1 178 aaKnown RBP10.61□□□□□ -0.71
SLIRP-211ENST00000557623 TMEM14AQ9Y6G1 99 aa10.61□□□□□ -0.71
SLIRP-211ENST00000557623 GGT3PA6NGU5 568 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 CLDN25C9JDP6 229 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 PHYHO14832 338 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 TBX1O43435 398 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 ALOX5APP20292 161 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 POLR2IP36954 125 aaKnown RBP10.6□□□□□ -0.71
SLIRP-211ENST00000557623 KRTAP1-1Q07627 177 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 GLYATL3Q5SZD4 288 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 DEGS2Q6QHC5 323 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 Q6ZR03 302 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 CBR4Q8N4T8 237 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 OR52H1Q8NGJ2 320 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 OR8J1Q8NGP2 316 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 SPRYD4Q8WW59 207 aaPredicted RBP10.6□□□□□ -0.71
SLIRP-211ENST00000557623 TRUB1Q8WWH5 349 aaKnown RBP10.6□□□□□ -0.71
SLIRP-211ENST00000557623 ASB17Q8WXJ9 295 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 TIMD4Q96H15 378 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 IL4I1Q96RQ9 567 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 AMELYQ99218 206 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 CNN2Q99439 309 aaKnown RBP10.6□□□□□ -0.71
SLIRP-211ENST00000557623 SLC30A2Q9BRI3 323 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 SLC22A4Q9H015 551 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 OR10A2Q9H208 303 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 IMPAD1Q9NX62 359 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 HAO2Q9NYQ3 351 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 N6AMT1Q9Y5N5 214 aa10.6□□□□□ -0.71
SLIRP-211ENST00000557623 TEP1Q99973 2627 aaKnown RBP10.59□□□□□ -0.71
SLIRP-211ENST00000557623 IFNL4K9M1U5 179 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 M0R129 80 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 BAG2O95816 211 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 MRPL3P09001 348 aaKnown RBP10.59□□□□□ -0.71
SLIRP-211ENST00000557623 IGHV4-31P0DP07 118 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 SLC2A1P11166 492 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 CFL1P23528 166 aaKnown RBP10.59□□□□□ -0.71
SLIRP-211ENST00000557623 DDOSTP39656 456 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 SRP9P49458 86 aaKnown RBP10.59□□□□□ -0.71
SLIRP-211ENST00000557623 ZNF121P58317 390 aaPredicted RBP10.59□□□□□ -0.71
SLIRP-211ENST00000557623 PSMA6P60900 246 aaKnown RBP10.59□□□□□ -0.71
SLIRP-211ENST00000557623 ZNF92Q03936 586 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 GABPB1Q06547 395 aaPredicted RBP10.59□□□□□ -0.71
SLIRP-211ENST00000557623 TMED1Q13445 227 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 ZSCAN26Q16670 478 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 TIGD6Q17RP2 521 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 ZBTB49Q6ZSB9 765 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 KRT77Q7Z794 578 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 PEG10Q86TG7 708 aaKnown RBP10.59□□□□□ -0.71
SLIRP-211ENST00000557623 BHLHE23Q8NDY6 225 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 FAM81AQ8TBF8 368 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 CCL17Q92583 94 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 RAB1CQ92928 201 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 RFKQ969G6 155 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 SPSB4Q96A44 273 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 EME1Q96AY2 570 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 HRASLS5Q96KN8 279 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 MROQ9BYG7 248 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 RGCCQ9H4X1 137 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 YAE1D1Q9NRH1 226 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 WARS2Q9UGM6 360 aaKnown RBP10.59□□□□□ -0.71
SLIRP-211ENST00000557623 ABCA1O95477 2261 aa10.59□□□□□ -0.71
SLIRP-211ENST00000557623 A0A1B0GWJ7 208 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 LRP5LA4QPB2 252 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 CD300LBA8K4G0 201 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 ZNF254O75437 659 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 HTR1FP30939 366 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 DCTDP32321 178 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms