RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 PATE4P0C8F1 98 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 IL7P13232 177 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 FOXG1P55316 489 aaPredicted RBP10.9□□□□□ -0.67
SHMT2-233ENST00000557529 PITPNAQ00169 270 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 PLP2Q04941 152 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 SPOCK1Q08629 439 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 OXA1LQ15070 435 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 EIF2S3LQ2VIR3 472 aaKnown RBP10.9□□□□□ -0.67
SHMT2-233ENST00000557529 GFOD2Q3B7J2 385 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 C1orf100Q5SVJ3 147 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 FAM166AQ6J272 317 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 PYHIN1Q6K0P9 492 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 ZNF529Q6P280 563 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 ZNF585AQ6P3V2 769 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 Q6ZSR3 168 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 NAA40Q86UY6 237 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 POC5Q8NA72 575 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 C9orf106Q8NAJ2 232 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 OR14K1Q8NGZ2 314 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 BCL2L2Q92843 193 aaPredicted RBP10.9□□□□□ -0.67
SHMT2-233ENST00000557529 EXTL1Q92935 676 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 ADAT3Q96EY9 351 aaPredicted RBP10.9□□□□□ -0.67
SHMT2-233ENST00000557529 ABCG5Q9H222 651 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 RGCCQ9H4X1 137 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 C14orf119Q9NWQ9 140 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 ZNF224Q9NZL3 707 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 RAXQ9Y2V3 346 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 V9GYS6 101 aa10.9□□□□□ -0.67
SHMT2-233ENST00000557529 MBD3L4A6NDZ8 208 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-233ENST00000557529 MBD3L3A6NE82 208 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-233ENST00000557529 MBD3L5A6NJ08 208 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-233ENST00000557529 FIGNL2A6NMB9 653 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 TPPPO94811 219 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 PTTG1O95997 202 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 IL18BPO95998 194 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 HLA-HP01893 362 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 LCATP04180 440 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 CRHP06850 196 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 ADRB1P08588 477 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 ITGA5P08648 1049 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 HOXD4P09016 255 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-233ENST00000557529 CD79AP11912 226 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 HTR2CP28335 458 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 THBS4P35443 961 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 ART1P52961 327 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 CLDN12P56749 244 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 P2RY14Q15391 338 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 BAK1Q16611 211 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 SFRP5Q5T4F7 317 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 TRIQKQ629K1 86 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 CDH26Q8IXH8 852 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 CCDC36Q8IYA8 594 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 GCNT2Q8N0V5 402 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 Q8N402 240 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 MBD3L2Q8NHZ7 208 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-233ENST00000557529 C15orf40Q8WUR7 153 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 S100A16Q96FQ6 103 aaKnown RBP10.89□□□□□ -0.67
SHMT2-233ENST00000557529 COX4I2Q96KJ9 171 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 LYZL4Q96KX0 146 aa10.89□□□□□ -0.67
SHMT2-233ENST00000557529 URB1O60287 2271 aaKnown RBP10.88□□□□□ -0.67
SHMT2-233ENST00000557529 A0A0G2JMP0 313 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 A0A0X1KG70 313 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 LOC100289279A0A1B0GTE1 492 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 A0A1B0GVG6 124 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 ZNHIT1O43257 154 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 SULT1B1O43704 296 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 TPOP07202 933 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 CSF3P09919 207 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 OCMP0CE72 109 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-233ENST00000557529 HOXB1P14653 301 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-233ENST00000557529 ABOP16442 354 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 KIR2DL2P43627 348 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-233ENST00000557529 RAB1AP62820 205 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 SNAI3Q3KNW1 292 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 GLYATL3Q5SZD4 288 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 ZNF324BQ6AW86 544 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-233ENST00000557529 Q6ZT83 130 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 CMTM4Q8IZR5 234 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 JAGN1Q8N5M9 183 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 CNEP1R1Q8N9A8 125 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 CPEB3Q8NE35 698 aaKnown RBP10.88□□□□□ -0.67
SHMT2-233ENST00000557529 OR4M2Q8NGB6 313 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 OR51A2Q8NGJ7 313 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 OR13C9Q8NGT0 318 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 PP6455Q8WZ26 134 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 AKAP1Q92667 903 aaKnown RBP eCLIP10.88□□□□□ -0.67
SHMT2-233ENST00000557529 ITFG2Q969R8 447 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 FAM3DQ96BQ1 224 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 SGK3Q96BR1 496 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 HAVCR1Q96D42 359 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 SLC25A38Q96DW6 304 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 ZFP3Q96NJ6 502 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 SORCS2Q96PQ0 1159 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 UQCC2Q9BRT2 126 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 RHBDL2Q9NX52 303 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 LUZP4Q9P127 313 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 TUBD1Q9UJT1 453 aa10.88□□□□□ -0.67
SHMT2-233ENST00000557529 CEP295Q9C0D2 2601 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 A0A1W2PQ09 198 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 E9PLN8 166 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms