RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 FAM206AQ9NX38 181 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 NPIPA1Q9UND3 350 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 WIF1Q9Y5W5 379 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 CPAMD8Q8IZJ3 1885 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 C13orf42A0A1B0GVH6 325 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 B4DGG1 531 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 FTCDNL1E5RQL4 147 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 SMAD9O15198 467 aaKnown RBP14.51□□□□□ -0.09
SHMT2-232ENST00000557487 SIGLEC5O15389 551 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 ABCD3P28288 659 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 SIGLEC14Q08ET2 396 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 KIAA0895LQ68EN5 471 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 OR52W1Q6IF63 320 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 TMEM71Q6P5X7 295 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 PRR22Q8IZ63 422 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 GVQW1Q8N7I0 195 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 KCNK17Q96T54 332 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 UQCC1Q9NVA1 299 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 LPAR3Q9UBY5 353 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 GPR132Q9UNW8 380 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 POMT1Q9Y6A1 747 aa14.51□□□□□ -0.09
SHMT2-232ENST00000557487 TLCD2A6NGC4 264 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 SYT7O43581 403 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 IGHV4-34P06331 123 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 FAM157CP0CG43 387 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 THEGLP0DJG4 465 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 ABOP16442 354 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 GNALP38405 381 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 SGCAQ16586 387 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 SLC29A4Q7RTT9 530 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 NAA40Q86UY6 237 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 METTL27Q8N6F8 245 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-232ENST00000557487 DMBX1Q8NFW5 382 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 MFSD8Q8NHS3 518 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 WWTR1Q9GZV5 400 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 SOHLH2Q9NX45 425 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 MYEF2Q9P2K5 600 aaKnown RBP14.5□□□□□ -0.09
SHMT2-232ENST00000557487 COPS7AQ9UBW8 275 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 FBXO9Q9UK97 447 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-232ENST00000557487 SPTBP11277 2137 aa14.5□□□□□ -0.09
SHMT2-232ENST00000557487 LOC100509620A0A075B734 347 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 SSX5O60225 188 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 TTRP02766 147 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 FPR2P25090 351 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 PAX6P26367 422 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 EIF3IQ13347 325 aaKnown RBP14.49□□□□□ -0.09
SHMT2-232ENST00000557487 TSC22D1Q15714 1073 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 ZNF528Q3MIS6 628 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 OTPQ5XKR4 325 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 UBALD2Q8IYN6 164 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 KDM8Q8N371 416 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 OR10H5Q8NGA6 315 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 OR52N4Q8NGI2 321 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 KCNG3Q8TAE7 436 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 MARCH1Q8TCQ1 289 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 ST8SIA1Q92185 356 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 SMIM8Q96KF7 97 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 SELENOIQ9C0D9 397 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 TREM1Q9NP99 234 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 CUTCQ9NTM9 273 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 ATG2BQ96BY7 2078 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 COL5A1P20908 1838 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-232ENST00000557487 TCRBV21S2A2A0A5A6 115 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 MPZL1O95297 269 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 GLULP15104 373 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 EMP2P54851 167 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 CLDN6P56747 220 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 ZXDAP98168 799 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 C1orf61Q13536 156 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 ZNF542PQ5EBM4 170 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 AVPI1Q5T686 147 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 TMEM92Q6UXU6 159 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 H1FNTQ75WM6 255 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-232ENST00000557487 PEG10Q86TG7 708 aaKnown RBP14.49□□□□□ -0.09
SHMT2-232ENST00000557487 C9orf40Q8IXQ3 194 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 ZSCAN4Q8NAM6 433 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-232ENST00000557487 NUBPLQ8TB37 319 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 ADAMTS17Q8TE56 1095 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 GLYATL2Q8WU03 294 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 CMBLQ96DG6 245 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 PBOV1Q9GZY1 135 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 FN3KRPQ9HA64 309 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 FANCFQ9NPI8 374 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 MEMO1Q9Y316 297 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 FLVCR1Q9Y5Y0 555 aa14.49□□□□□ -0.09
SHMT2-232ENST00000557487 PCP4L1A6NKN8 68 aa14.48□□□□□ -0.09
SHMT2-232ENST00000557487 ZNF705EA8MWA4 302 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-232ENST00000557487 IGLV3-19P01714 112 aa14.48□□□□□ -0.09
SHMT2-232ENST00000557487 APOC1P02654 83 aa14.48□□□□□ -0.09
SHMT2-232ENST00000557487 GNB3P16520 340 aa14.48□□□□□ -0.09
SHMT2-232ENST00000557487 GABRG2P18507 467 aa14.48□□□□□ -0.09
SHMT2-232ENST00000557487 ZNF93P35789 620 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-232ENST00000557487 CAV2P51636 162 aa14.48□□□□□ -0.09
SHMT2-232ENST00000557487 SUMO3P55854 103 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-232ENST00000557487 TMEM88Q6PEY1 159 aa14.48□□□□□ -0.09
SHMT2-232ENST00000557487 ZNF441Q8N8Z8 693 aa14.48□□□□□ -0.09
SHMT2-232ENST00000557487 OR4A4PQ8NGN8 299 aa14.48□□□□□ -0.09
SHMT2-232ENST00000557487 TMED6Q8WW62 240 aa14.48□□□□□ -0.09
SHMT2-232ENST00000557487 TSLPQ969D9 159 aa14.48□□□□□ -0.09
SHMT2-232ENST00000557487 SLAMF6Q96DU3 332 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms