RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SNAI3Q3KNW1 292 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 KRTAP27-1Q3LI81 207 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 ZNF362Q5T0B9 420 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-210ENST00000557431 GPR139Q6DWJ6 353 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 LYPD4Q6UWN0 246 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 COLCA1Q6ZS62 124 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 SLC26A10Q8NG04 563 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 OR4K13Q8NH42 304 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 OR52J3Q8NH60 311 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 FAM110DQ8TAY7 271 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-210ENST00000557431 Q8TCH9 128 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 FAM162AQ96A26 154 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 WDFY2Q96P53 400 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 GPX7Q96SL4 187 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-210ENST00000557431 ADAT1Q9BUB4 502 aaKnown RBP11.65□□□□□ -0.54
SLIRP-210ENST00000557431 SIRPDQ9H106 197 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 NOX4Q9NPH5 578 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 PNRC2Q9NPJ4 139 aaKnown RBP11.65□□□□□ -0.54
SLIRP-210ENST00000557431 RPRD1BQ9NQG5 326 aaKnown RBP11.65□□□□□ -0.54
SLIRP-210ENST00000557431 ACOXLQ9NUZ1 547 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 RNF7Q9UBF6 113 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 AURKCQ9UQB9 309 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 TMEM5Q9Y2B1 443 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 ENPP4Q9Y6X5 453 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 V9GYQ6 96 aa11.65□□□□□ -0.54
SLIRP-210ENST00000557431 IGHV1-69DA0A0B4J2H0 117 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 A0A1B0GWJ7 208 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 A0A1W2PRD5 423 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 A0A1W2PRF3 423 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 A0A1W2PRM7 423 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 LGALS8O00214 317 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 TIMM23O14925 209 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 OR10H3O60404 316 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 IGHV1-69P01742 117 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 H1F0P07305 194 aaKnown RBP11.64□□□□□ -0.55
SLIRP-210ENST00000557431 GSK3BP49841 420 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 TRAP1Q12931 704 aaKnown RBP11.64□□□□□ -0.55
SLIRP-210ENST00000557431 ZNF620Q6ZNG0 422 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 Q6ZSV7 163 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 PGAP1Q75T13 922 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 MRPL21Q7Z2W9 205 aaKnown RBP11.64□□□□□ -0.55
SLIRP-210ENST00000557431 ADCK1Q86TW2 530 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 FAM86B1Q8N7N1 296 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 SCCPDHQ8NBX0 429 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 SDR9C7Q8NEX9 313 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 SPRYD4Q8WW59 207 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-210ENST00000557431 GATAD2BQ8WXI9 593 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 MAP6Q96JE9 813 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 FAM71F1Q96KD3 344 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-210ENST00000557431 NDEL1Q9GZM8 345 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 C1orf123Q9NWV4 160 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 ERVK-18Q9QC07 812 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 N6AMT1Q9Y5N5 214 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 CAPN7Q9Y6W3 813 aa11.64□□□□□ -0.55
SLIRP-210ENST00000557431 HLA-DQA2P01906 255 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 GRPP07492 148 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 HIST1H1CP16403 213 aaKnown RBP11.63□□□□□ -0.55
SLIRP-210ENST00000557431 RPS6KA3P51812 740 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 PROK1P58294 105 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 ZNF92Q03936 586 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 TAF9Q16594 264 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 OCLNQ16625 522 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 METTL11BQ5VVY1 283 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 DPY19L2P2Q6ZN68 376 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 BTN2A1Q7KYR7 527 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 PIP4P2Q8N4L2 257 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 TMEM86BQ8N661 226 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 FANK1Q8TC84 345 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 SSMEM1Q8WWF3 244 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 ST8SIA4Q92187 359 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 SEH1LQ96EE3 360 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 ATF6BQ99941 703 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 FN3KRPQ9HA64 309 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 TCF7L1Q9HCS4 588 aa11.63□□□□□ -0.55
SLIRP-210ENST00000557431 MRPL22Q9NWU5 206 aaKnown RBP11.63□□□□□ -0.55
SLIRP-210ENST00000557431 hCG_1807616A0A1W2PRN6 198 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 OOEPA6NGQ2 149 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 TVP23AA6NH52 213 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 SLC22A31A6NKX4 558 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 A6NLC8 198 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 CD300LBA8K4G0 201 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 M0R135 149 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 DVL1O14640 695 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 SLC22A2O15244 555 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 FSTL3O95633 263 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 TXNDC12O95881 172 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 PRB2P02812 416 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-210ENST00000557431 SLC2A1P11166 492 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 CPT2P23786 658 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 CRABP1P29762 137 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 PYCR1P32322 319 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 GGT2P36268 569 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 IER3P46695 156 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 MALLQ13021 153 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 KLRD1Q13241 179 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 GLYATL3Q5SZD4 288 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 DNM1P34Q6PK57 102 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 SMARCD3Q6STE5 483 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 VMO1Q7Z5L0 202 aa11.62□□□□□ -0.55
SLIRP-210ENST00000557431 CYP4Z1Q86W10 505 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms