RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 SSX3Q99909 188 aa3.79□□□□□ -1.8
SCFD1-223ENST00000557076 ASCL2Q99929 193 aa3.79□□□□□ -1.8
SCFD1-223ENST00000557076 MRPL13Q9BYD1 178 aaKnown RBP3.79□□□□□ -1.8
SCFD1-223ENST00000557076 TINAGL1Q9GZM7 467 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-223ENST00000557076 PCDHAC1Q9H158 963 aa3.79□□□□□ -1.8
SCFD1-223ENST00000557076 DPH5Q9H2P9 285 aa3.79□□□□□ -1.8
SCFD1-223ENST00000557076 C20orf141Q9NUB4 165 aa3.79□□□□□ -1.8
SCFD1-223ENST00000557076 DCDC2Q9UHG0 476 aa3.79□□□□□ -1.8
SCFD1-223ENST00000557076 UTP11Q9Y3A2 253 aaKnown RBP3.79□□□□□ -1.8
SCFD1-223ENST00000557076 TIMM10BQ9Y5J6 103 aa3.79□□□□□ -1.8
SCFD1-223ENST00000557076 FRAS1Q86XX4 4008 aa3.79□□□□□ -1.8
SCFD1-223ENST00000557076 HUWE1Q7Z6Z7 4374 aaKnown RBP3.79□□□□□ -1.8
SCFD1-223ENST00000557076 MEIOCA2RUB1 952 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 TMEM233B4DJY2 109 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 OR10H3O60404 316 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 PEX11AO75192 247 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 GLRA3O75311 464 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 MT-ATP6P00846 226 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 IL6RP08887 468 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-223ENST00000557076 NPSP0C0P6 89 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 PGA4P0DJD7 388 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 PGA3P0DJD8 388 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 IRF2P14316 349 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 ZNF32P17041 273 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 CBLP22681 906 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 PAFAH1B1P43034 410 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 ZNF84P51523 738 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 MRPS25P82663 173 aaKnown RBP3.78□□□□□ -1.8
SCFD1-223ENST00000557076 CASP8Q14790 479 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 PLECQ15149 4684 aaKnown RBP3.78□□□□□ -1.8
SCFD1-223ENST00000557076 TWIST1Q15672 202 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 MAPK11Q15759 364 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 C6orf136Q5SQH8 315 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 FAM27BQ5VT28 67 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 ANXA8L1Q5VT79 327 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 FAM91A1Q658Y4 838 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 OR4F3Q6IEY1 312 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 ULK3Q6PHR2 472 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 ZDHHC24Q6UX98 284 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 ZYG11AQ6WRX3 759 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 ZNF836Q6ZNA1 936 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 RFPL4BQ6ZWI9 263 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 MAVSQ7Z434 540 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 VMO1Q7Z5L0 202 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 SERPINA11Q86U17 422 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 MOGAT3Q86VF5 341 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 ANKRD46Q86W74 232 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 SLC35F6Q8N357 371 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 OR2C3Q8N628 320 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 NPEPL1Q8NDH3 523 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 OR8G5Q8NG78 346 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 OR5AU1Q8NGC0 362 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 OR4A15Q8NGL6 344 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 OR5J2Q8NH18 312 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 AKR7LQ8NHP1 331 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 PIFOQ8TCI5 191 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 ACMSDQ8TDX5 336 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 TNFRSF14Q92956 283 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 ZNF583Q96ND8 569 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 TECTBQ96PL2 329 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 PAFAH2Q99487 392 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 SEPHS2Q99611 448 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 SLC35A5Q9BS91 424 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 DCTN5Q9BTE1 182 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 OR2H1Q9GZK4 316 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 SEMA6AQ9H2E6 1030 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 ZNF702PQ9H963 129 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 CCNB1IP1Q9NPC3 277 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 TRIM36Q9NQ86 728 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 MRPS18AQ9NVS2 196 aaKnown RBP3.78□□□□□ -1.8
SCFD1-223ENST00000557076 TAS2R5Q9NYW4 299 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 CALML5Q9NZT1 146 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 SLC17A7Q9P2U7 560 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 KAAG1Q9UBP8 84 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 MARCOQ9UEW3 520 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-223ENST00000557076 NDRG4Q9ULP0 352 aaKnown RBP3.78□□□□□ -1.8
SCFD1-223ENST00000557076 TMCC3Q9ULS5 477 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 STARD10Q9Y365 291 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 IFT52Q9Y366 437 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 TSSC4Q9Y5U2 329 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-223ENST00000557076 KIAA1109Q2LD37 5005 aa3.78□□□□□ -1.8
SCFD1-223ENST00000557076 TRAV38-1A0A0B4J264 116 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 A0A0G2JPF8 293 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 A0A1B0GWA3 101 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 TCRBV4S1A1TA0A5B7 111 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 VGLL3A8MV65 326 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 HNRNPCL2B2RXH8 293 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 HNRNPCL3B7ZW38 293 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 H0YHG0 523 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 LGALS8O00214 317 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 ADAM20O43506 726 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 HNRNPCL1O60812 293 aaKnown RBP3.77□□□□□ -1.81
SCFD1-223ENST00000557076 OR6A2O95222 327 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 IGHG1P01857 330 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 CST2P09228 141 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 CCDC159P0C7I6 412 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 HNRNPCL4P0DMR1 293 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 ADORA3P0DMS8 318 aa3.77□□□□□ -1.81
SCFD1-223ENST00000557076 COX5BP10606 129 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms