RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 TMEM249Q2WGJ8 235 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 GLYATL3Q5SZD4 288 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 PRSS45Q7RTY3 260 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 SPRYD4Q8WW59 207 aaPredicted RBP9.07□□□□□ -0.96
LINC00239-201ENST00000556973 HPS1Q92902 700 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 SPSB4Q96A44 273 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 SGK3Q96BR1 496 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 CNN2Q99439 309 aaKnown RBP9.07□□□□□ -0.96
LINC00239-201ENST00000556973 SLC30A2Q9BRI3 323 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 MROQ9BYG7 248 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 IMPAD1Q9NX62 359 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 F8P00451 2351 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 IGHV4-61A0A0C4DH41 118 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 A0A1B0GWJ7 208 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 GGT3PA6NGU5 568 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 ACOD1A6NK06 481 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 TBX1O43435 398 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 PPIHO43447 177 aaKnown RBP9.06□□□□□ -0.96
LINC00239-201ENST00000556973 CD5LO43866 347 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 LILRA1O75019 489 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 MRPL3P09001 348 aaKnown RBP9.06□□□□□ -0.96
LINC00239-201ENST00000556973 SBK2P0C263 348 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 SLC2A1P11166 492 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 ANPEPP15144 967 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 CFL1P23528 166 aaKnown RBP9.06□□□□□ -0.96
LINC00239-201ENST00000556973 DCTDP32321 178 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 ZNF121P58317 390 aaPredicted RBP9.06□□□□□ -0.96
LINC00239-201ENST00000556973 ROM1Q03395 351 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 SLC3A1Q07837 685 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 POU4F2Q12837 409 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 SLC25A30Q5SVS4 291 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 MEDAGQ5VYS4 303 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 CYB5R2Q6BCY4 276 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 LRRN1Q6UXK5 716 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 Q71RC1 249 aaPredicted RBP9.06□□□□□ -0.96
LINC00239-201ENST00000556973 FAM57BQ71RH2 274 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 ZNF679Q8IYX0 411 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 BHLHE23Q8NDY6 225 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 OR2AE1Q8NHA4 323 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 FAM81AQ8TBF8 368 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 CCL17Q92583 94 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 RAB1CQ92928 201 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 UBE2FQ969M7 185 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 PGAM5Q96HS1 289 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 MBOAT4Q96T53 435 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 SLC22A4Q9H015 551 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 OR10A2Q9H208 303 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 RGCCQ9H4X1 137 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 ADGRL4Q9HBW9 690 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 C8orf4Q9NR00 106 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 CLN6Q9NWW5 311 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 DNAJC27Q9NZQ0 273 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 KLHDC2Q9Y2U9 406 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 NOP16Q9Y3C1 178 aaKnown RBP9.06□□□□□ -0.96
LINC00239-201ENST00000556973 LRP12Q9Y561 859 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 GMPPBQ9Y5P6 360 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 DYSFO75923 2080 aa9.06□□□□□ -0.96
LINC00239-201ENST00000556973 LOC100130705A0A1B0GUX0 176 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 LRP5LA4QPB2 252 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 C5orf63A6NC05 138 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 SNTNA6NMZ2 147 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 CD300LBA8K4G0 201 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 CLDN25C9JDP6 229 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 ANKRD65E5RJM6 399 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 ZNF670-ZNF695F2Z2N8 137 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 H0YL77 283 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 IFNL4K9M1U5 179 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 MLNRO43193 412 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 MPZL2O60487 215 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 GMDSO60547 372 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 OR2T7P0C7T2 308 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 IGHV4-31P0DP07 118 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 ATP6V1E1P36543 226 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 SRP9P49458 86 aaKnown RBP9.05□□□□□ -0.96
LINC00239-201ENST00000556973 GZMKP49863 264 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 PRSS12P56730 875 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 CXCR4P61073 352 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 SNRPGP62308 76 aaKnown RBP9.05□□□□□ -0.96
LINC00239-201ENST00000556973 FAM3AP98173 230 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 EGR3Q06889 387 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 KRTAP1-1Q07627 177 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 TRIP10Q15642 601 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 OCLNQ16625 522 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 TIGD6Q17RP2 521 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 SPRNQ5BIV9 151 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 PEG10Q86TG7 708 aaKnown RBP9.05□□□□□ -0.96
LINC00239-201ENST00000556973 SLC35F2Q8IXU6 374 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 CELF2-AS1Q8N7Q2 184 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 OR51G2Q8NGK0 314 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 OR2T27Q8NH04 317 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 ITLN1Q8WWA0 313 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 TIMD4Q96H15 378 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 REEP6Q96HR9 211 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 RDH12Q96NR8 316 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 OR2V2Q96R30 315 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 OR8B4Q96RC9 309 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 BRD7Q9NPI1 651 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 FAM118AQ9NWS6 357 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 TREM2Q9NZC2 230 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 MRPL15Q9P015 296 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms