RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 ADAT1Q9BUB4 502 aaKnown RBP15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 FN3KRPQ9HA64 309 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 SMURF1Q9HCE7 757 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 RPRD1BQ9NQG5 326 aaKnown RBP15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 KIF17Q9P2E2 1029 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 ERVK-18Q9QC07 812 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 RNF7Q9UBF6 113 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 POMT1Q9Y6A1 747 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 LGALS8O00214 317 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 ARPC3O15145 178 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 SASH3O75995 380 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 PTBP3O95758 552 aaKnown RBP15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 RENP00797 406 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 HIST1H1CP16403 213 aaKnown RBP15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 CA6P23280 308 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 SLC6A6P31641 620 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 KCNJ8Q15842 424 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 SLC36A3Q495N2 470 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 ZNF620Q6ZNG0 422 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 RHOUQ7L0Q8 258 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 MRPL21Q7Z2W9 205 aaKnown RBP15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 ZBTB46Q86UZ6 589 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 FAM86B1Q8N7N1 296 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 BOLLQ8N9W6 283 aaKnown RBP15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 OR2AJ1Q8NGZ0 328 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 OR4K13Q8NH42 304 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 SSMEM1Q8WWF3 244 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 GATAD2BQ8WXI9 593 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 CCT8L2Q96SF2 557 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 SLC22A4Q9H015 551 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 OR52D1Q9H346 318 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 FN3KQ9H479 309 aa15.16■□□□□ 0.02
VIPAS39-209ENST00000556909 CD300LBA8K4G0 201 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 C3orf80F5H4A9 247 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 M0QZ24 198 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 M0R135 149 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 ADAM20O43506 726 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 LIPFP07098 398 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 ANOS1P23352 680 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 NUDT2P50583 147 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 TPTEP56180 551 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 KRTAP10-3P60369 221 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 RPL15P61313 204 aaKnown RBP15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 RFX4Q33E94 735 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 SNAI3Q3KNW1 292 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 METTL11BQ5VVY1 283 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 ZNF799Q96GE5 643 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 MAP6Q96JE9 813 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 WDFY2Q96P53 400 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 SIRPDQ9H106 197 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 MMP27Q9H306 513 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 ACOXLQ9NUZ1 547 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 MRPL22Q9NWU5 206 aaKnown RBP15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 ABCD2Q9UBJ2 740 aa15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 NOP16Q9Y3C1 178 aaKnown RBP15.15■□□□□ 0.02
VIPAS39-209ENST00000556909 IGHV1-69DA0A0B4J2H0 117 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 A0A0G2JK05 382 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 OR6C68A6NDL8 312 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 NDUFAB1O14561 156 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 FCN3O75636 299 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 IGHV1-69P01742 117 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 HLA-DQA2P01906 255 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 H2AFXP16104 143 aaPredicted RBP15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 ZNF92Q03936 586 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 PDCD1Q15116 288 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 OR8B8Q15620 311 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 HACD2Q6Y1H2 254 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 PNLDC1Q8NA58 520 aaKnown RBP15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 SDR9C7Q8NEX9 313 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 OR2AE1Q8NHA4 323 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 DYRK2Q92630 601 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 IFT27Q9BW83 186 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 TRIM15Q9C019 465 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 EFCAB1Q9HAE3 211 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 TRIM36Q9NQ86 728 aa15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 ARGLU1Q9NWB6 273 aaPredicted RBP15.14■□□□□ 0.01
VIPAS39-209ENST00000556909 TRAV38-1A0A0B4J264 116 aa15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 OOEPA6NGQ2 149 aa15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 TIMM23O14925 209 aa15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 GPR137BO60478 399 aa15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 GMDSO60547 372 aa15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 KRT72Q14CN4 511 aa15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 PLPP7Q8NBV4 271 aa15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 TBC1D15Q8TC07 691 aa15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 LHX4Q969G2 390 aa15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 SPTSSAQ969W0 71 aa15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 RASSF4Q9H2L5 321 aa15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 DCAF13Q9NV06 445 aaKnown RBP15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 KCNG2Q9UJ96 466 aa15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 SAMD4AQ9UPU9 718 aaKnown RBP15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 RNF114Q9Y508 228 aa15.13■□□□□ 0.01
VIPAS39-209ENST00000556909 A0A0U1RQK1 487 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 C5orf63A6NC05 138 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 NDUFA2O43678 99 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 IGHV4-59P01825 116 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 GYPAP02724 150 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 NOS3P29474 1203 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 RPS27P42677 84 aaKnown RBP15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 SPIBQ01892 262 aa15.12■□□□□ 0.01
VIPAS39-209ENST00000556909 GLYATL3Q5SZD4 288 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms