RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 MEP1BQ16820 701 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 TOR2AQ5JU69 321 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 DCAF12L2Q5VW00 463 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 OTPQ5XKR4 325 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 LCN8Q6JVE9 175 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 FBXW12Q6X9E4 464 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 PGAP1Q75T13 922 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 C1orf87Q8N0U7 546 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 PRR18Q8N4B5 295 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 OR8G5Q8NG78 346 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 OR9Q2Q8NGE9 314 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 ZNF418Q8TF45 676 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-222ENST00000556768 SPRYD4Q8WW59 207 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-222ENST00000556768 GTF3AQ92664 365 aaKnown RBP6.2□□□□□ -1.42
SCFD1-222ENST00000556768 CCDC124Q96CT7 223 aaKnown RBP6.2□□□□□ -1.42
SCFD1-222ENST00000556768 OR2V2Q96R30 315 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 TSSK6Q9BXA6 273 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 EGLN3Q9H6Z9 239 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 METTL17Q9H7H0 456 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-222ENST00000556768 TMEM106BQ9NUM4 274 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 TMEM100Q9NV29 134 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 NPTNQ9Y639 398 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 LHFPL6Q9Y693 200 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 A0A0A6YYJ9 748 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 FAM157AC9JC47 383 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 H3BN98 237 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 WNT9BO14905 357 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 PLPP2O43688 288 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 E2F6O75461 281 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 GPANK1O95872 356 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 CST1P01037 141 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 IGHV2-5P01817 119 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 PAICSP22234 425 aaKnown RBP6.2□□□□□ -1.42
SCFD1-222ENST00000556768 HIST1H3AP68431 136 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 TRAP1Q12931 704 aaKnown RBP6.2□□□□□ -1.42
SCFD1-222ENST00000556768 HLXQ14774 488 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-222ENST00000556768 DNAL1Q4LDG9 190 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 HIST2H3PS2Q5TEC6 136 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 OR2T2Q6IF00 324 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 SLC18B1Q6NT16 456 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 HIST2H3AQ71DI3 136 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 LINC00346Q8IVM7 164 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 OR5AS1Q8N127 324 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 MUC20Q8N307 709 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-222ENST00000556768 LNX2Q8N448 690 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 CYB561A3Q8NBI2 242 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 BHLHE23Q8NDY6 225 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 NANPQ8TBE9 248 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 TEX47Q8TBZ9 253 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 BCAS4Q8TDM0 211 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 OTULINQ96BN8 352 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 C16orf92Q96LL3 132 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 BTBD10Q9BSF8 475 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 THTPAQ9BU02 230 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 CHID1Q9BWS9 393 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 SLC22A4Q9H015 551 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 C7orf69Q9H7B7 122 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 SP140LQ9H930 580 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 PTTG3PQ9NZH4 202 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 ZNF69Q9UC07 566 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 CACNG2Q9Y698 323 aa6.2□□□□□ -1.42
SCFD1-222ENST00000556768 M0R135 149 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 BHLHE40O14503 412 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 APOC1P02654 83 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 ATP6V1B2P21281 511 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 CPT2P23786 658 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 FPR2P25090 351 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 GGT2P36268 569 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 MDH2P40926 338 aaKnown RBP6.19□□□□□ -1.42
SCFD1-222ENST00000556768 BTG1P62324 171 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 MZT1Q08AG7 82 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 ESCO2Q56NI9 601 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 TRPM8Q7Z2W7 1104 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 MRPL21Q7Z2W9 205 aaKnown RBP6.19□□□□□ -1.42
SCFD1-222ENST00000556768 LRRC28Q86X40 367 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-222ENST00000556768 OR6K6Q8NGW6 343 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 GIPC3Q8TF64 312 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 ERGIC1Q969X5 290 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 UTP4Q969X6 686 aaKnown RBP6.19□□□□□ -1.42
SCFD1-222ENST00000556768 ZNF799Q96GE5 643 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 JMJD8Q96S16 334 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 COPS4Q9BT78 406 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 C1QTNF5Q9BXJ0 243 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 DGCR6LQ9BY27 220 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 WDR76Q9H967 626 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 GCM1Q9NP62 436 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 CENPMQ9NSP4 180 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 TAS2R1Q9NYW7 299 aa6.19□□□□□ -1.42
SCFD1-222ENST00000556768 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.18□□□□□ -1.429e-7■■■■■ 35.8
SCFD1-222ENST00000556768 DHRS12A0PJE2 317 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 TMEM82A0PJX8 343 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 AQP12BA6NM10 295 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 IQCF6A8MYZ5 107 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 ZNF593O00488 134 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-222ENST00000556768 SOX14O95416 240 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 SPARCP09486 303 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 ACSM4P0C7M7 580 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 POU1F1P28069 291 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 PYCR1P32322 319 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 RASSF2P50749 326 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms