RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 RBM45Q8IUH3 476 aaKnown RBP4.48□□□□□ -1.69
SRP54-211ENST00000556445 LACC1Q8IV20 430 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 CROCCP3Q8IVE0 287 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 GID4Q8IVV7 300 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 BEST3Q8N1M1 668 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 CLIP4Q8N3C7 705 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 SLC25A45Q8N413 288 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 GCSAMQ8N6F7 178 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 Q8N9G6 341 aaPredicted RBP4.48□□□□□ -1.69
SRP54-211ENST00000556445 PLPP5Q8NEB5 264 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 FAM83FQ8NEG4 500 aaPredicted RBP4.48□□□□□ -1.69
SRP54-211ENST00000556445 OR5M8Q8NGP6 311 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 OR1L3Q8NH93 324 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 TMEM163Q8TC26 289 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 LRRC20Q8TCA0 184 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 TMEM239Q8WW34 195 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 TMEM45BQ96B21 275 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 ZNF501Q96CX3 271 aaPredicted RBP4.48□□□□□ -1.69
SRP54-211ENST00000556445 MRPL53Q96EL3 112 aaKnown RBP4.48□□□□□ -1.69
SRP54-211ENST00000556445 GRAMD2BQ96HH9 432 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 FUNDC2Q9BWH2 189 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 SLC19A3Q9BZV2 496 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 SLA2Q9H6Q3 261 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 Q9H8V8 135 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 ACOT13Q9NPJ3 140 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 PNO1Q9NRX1 252 aaKnown RBP4.48□□□□□ -1.69
SRP54-211ENST00000556445 CYSLTR2Q9NS75 346 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 DDX28Q9NUL7 540 aaKnown RBP4.48□□□□□ -1.69
SRP54-211ENST00000556445 ZNF226Q9NYT6 803 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 MTCH1Q9NZJ7 389 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 C1RLQ9NZP8 487 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 EMC3Q9P0I2 261 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 RCC2Q9P258 522 aaKnown RBP4.48□□□□□ -1.69
SRP54-211ENST00000556445 MUTYHQ9UIF7 546 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 ENPP5Q9UJA9 477 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 RARRES3Q9UL19 164 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.48□□□□□ -1.69
SRP54-211ENST00000556445 SLC7A7Q9UM01 511 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 ERVK-19Q9WJR5 959 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 EXOSC1Q9Y3B2 195 aaKnown RBP4.48□□□□□ -1.69
SRP54-211ENST00000556445 MED31Q9Y3C7 131 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 CDH10Q9Y6N8 788 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 CHD7Q9P2D1 2997 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 TNRC6BQ9UPQ9 1833 aaKnown RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 IGLV3-12A0A075B6K2 115 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 IGKV3D-11A0A0A0MRZ8 115 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 A0A1W2PQD3 144 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 SERINC4A6NH21 518 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 C17orf105B2RV13 164 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 H3BMH7 237 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 H3BMQ9 156 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 M0R296 226 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 MYL12BO14950 172 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 NBR2O15453 112 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 HCRTR1O43613 425 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 TPST2O60704 377 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 GABARAPO95166 117 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 NDUFB8O95169 186 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 SOX14O95416 240 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 RAB36O95755 333 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 FADS2O95864 444 aaKnown RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 RPLP0P05388 317 aaKnown RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 NGFRP08138 427 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 HTR1AP08908 422 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 ACAA1P09110 424 aaPredicted RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 ZNF883P0CG24 379 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 GIMD1P0DJR0 217 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 TDGF1P13385 188 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 CCL2P13500 99 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 GP9P14770 177 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 MYL12AP19105 171 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 IL12BP29460 328 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 DCTDP32321 178 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 OMPP47874 163 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 NR0B1P51843 470 aaKnown RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 CTBP2P56545 445 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 BTG2P78543 158 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 PRKCDQ05655 676 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 ZFP36L1Q07352 338 aaKnown RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 FAM27E3Q08E93 113 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 RAB40BQ12829 278 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 NSDHLQ15738 373 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 DGUOKQ16854 277 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 EIF2S3LQ2VIR3 472 aaKnown RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 HLA-BQ31612 363 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 C6orf226Q5I0X4 101 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 PDZK1Q5T2W1 519 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 CCNJQ5T5M9 372 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 ULK3Q6PHR2 472 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 ZNF620Q6ZNG0 422 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 NDUFAF7Q7L592 441 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 CCDC71Q8IV32 467 aaPredicted RBP4.47□□□□□ -1.69
SRP54-211ENST00000556445 ZNF614Q8N883 585 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 TCEANCQ8N8B7 351 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 ZNF615Q8N8J6 731 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 THAP8Q8NA92 274 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 SYT14Q8NB59 555 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 PROKR2Q8NFJ6 384 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 B3GNT7Q8NFL0 401 aa4.47□□□□□ -1.69
SRP54-211ENST00000556445 KBTBD8Q8NFY9 601 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms