RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 MPPED2Q15777 294 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 ZNF362Q5T0B9 420 aaPredicted RBP18.87■□□□□ 0.61
ACTN1-220ENST00000556433 LYPD2Q6UXB3 125 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 CYP2R1Q6VVX0 501 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 PARP8Q8N3A8 854 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 C19orf18Q8NEA5 215 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 OR51L1Q8NGJ5 315 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 UPRTQ96BW1 309 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 C1orf147Q96MC9 270 aaPredicted RBP18.87■□□□□ 0.61
ACTN1-220ENST00000556433 BTBD10Q9BSF8 475 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 TRIM15Q9C019 465 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 SLC22A4Q9H015 551 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 ZMAT3Q9HA38 289 aaKnown RBP18.87■□□□□ 0.61
ACTN1-220ENST00000556433 IL20Q9NYY1 176 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 CLN8Q9UBY8 286 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 PCDHGB1Q9Y5G3 927 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 MTNR1AP48039 350 aa18.86■□□□□ 0.61
ACTN1-220ENST00000556433 ZNF92Q03936 586 aa18.86■□□□□ 0.61
ACTN1-220ENST00000556433 SNAI3Q3KNW1 292 aa18.86■□□□□ 0.61
ACTN1-220ENST00000556433 LYPD4Q6UWN0 246 aa18.86■□□□□ 0.61
ACTN1-220ENST00000556433 DCDC5Q6ZRR9 648 aa18.86■□□□□ 0.61
ACTN1-220ENST00000556433 PIGWQ7Z7B1 504 aa18.86■□□□□ 0.61
ACTN1-220ENST00000556433 SLC37A3Q8NCC5 494 aa18.86■□□□□ 0.61
ACTN1-220ENST00000556433 DACT3Q96B18 629 aaPredicted RBP18.86■□□□□ 0.61
ACTN1-220ENST00000556433 NUDT16L1Q9BRJ7 211 aaKnown RBP18.86■□□□□ 0.61
ACTN1-220ENST00000556433 NOP16Q9Y3C1 178 aaKnown RBP18.86■□□□□ 0.61
ACTN1-220ENST00000556433 SOX21Q9Y651 276 aaPredicted RBP18.86■□□□□ 0.61
ACTN1-220ENST00000556433 DOCK11Q5JSL3 2073 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 GGT3PA6NGU5 568 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 CCNB2O95067 398 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 GYS2P54840 703 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 GNGT1P63211 74 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 WDR25Q64LD2 544 aaPredicted RBP18.85■□□□□ 0.61
ACTN1-220ENST00000556433 ZNF770Q6IQ21 691 aaPredicted RBP18.85■□□□□ 0.61
ACTN1-220ENST00000556433 DRAM2Q6UX65 266 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 RASSF6Q6ZTQ3 369 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 DCXRQ7Z4W1 244 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 OR4C15Q8NGM1 316 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 OR8D4Q8NGM9 314 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 OR9Q1Q8NGQ5 310 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 OR2AE1Q8NHA4 323 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 ZNF747Q9BV97 191 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 TSSK6Q9BXA6 273 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 FN3KRPQ9HA64 309 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 ACTR3BQ9P1U1 418 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 RNF7Q9UBF6 113 aa18.85■□□□□ 0.61
ACTN1-220ENST00000556433 GMDSO60547 372 aa18.84■□□□□ 0.61
ACTN1-220ENST00000556433 DCTN3O75935 186 aa18.84■□□□□ 0.61
ACTN1-220ENST00000556433 SPARCP09486 303 aa18.84■□□□□ 0.61
ACTN1-220ENST00000556433 ATP6V1B2P21281 511 aa18.84■□□□□ 0.61
ACTN1-220ENST00000556433 PRKXP51817 358 aa18.84■□□□□ 0.61
ACTN1-220ENST00000556433 PPP1R8Q12972 351 aaKnown RBP18.84■□□□□ 0.61
ACTN1-220ENST00000556433 TAF13Q15543 124 aa18.84■□□□□ 0.61
ACTN1-220ENST00000556433 C9orf139Q6ZV77 190 aa18.84■□□□□ 0.61
ACTN1-220ENST00000556433 BOLLQ8N9W6 283 aaKnown RBP18.84■□□□□ 0.61
ACTN1-220ENST00000556433 SLC25A28Q96A46 364 aa18.84■□□□□ 0.61
ACTN1-220ENST00000556433 COPS4Q9BT78 406 aa18.84■□□□□ 0.61
ACTN1-220ENST00000556433 CENPMQ9NSP4 180 aa18.84■□□□□ 0.61
ACTN1-220ENST00000556433 TBC1D23Q9NUY8 699 aa18.84■□□□□ 0.61
ACTN1-220ENST00000556433 N6AMT1Q9Y5N5 214 aa18.84■□□□□ 0.61
ACTN1-220ENST00000556433 C5orf63A6NC05 138 aa18.83■□□□□ 0.6
ACTN1-220ENST00000556433 PLATP00750 562 aa18.83■□□□□ 0.6
ACTN1-220ENST00000556433 RNASE1P07998 156 aaKnown RBP18.83■□□□□ 0.6
ACTN1-220ENST00000556433 PSKH1P11801 424 aa18.83■□□□□ 0.6
ACTN1-220ENST00000556433 ANOS1P23352 680 aa18.83■□□□□ 0.6
ACTN1-220ENST00000556433 FMO3P31513 532 aa18.83■□□□□ 0.6
ACTN1-220ENST00000556433 OTX1P32242 354 aaPredicted RBP18.83■□□□□ 0.6
ACTN1-220ENST00000556433 HOXA4Q00056 320 aaPredicted RBP18.83■□□□□ 0.6
ACTN1-220ENST00000556433 SLC9A3R2Q15599 337 aa18.83■□□□□ 0.6
ACTN1-220ENST00000556433 GLYATL3Q5SZD4 288 aa18.83■□□□□ 0.6
ACTN1-220ENST00000556433 SFRP4Q6FHJ7 346 aaPredicted RBP18.83■□□□□ 0.6
ACTN1-220ENST00000556433 ZNF841Q6ZN19 808 aa18.83■□□□□ 0.6
ACTN1-220ENST00000556433 LNX2Q8N448 690 aa18.83■□□□□ 0.6
ACTN1-220ENST00000556433 FITM2Q8N6M3 262 aa18.83■□□□□ 0.6
ACTN1-220ENST00000556433 ZNF511Q8NB15 262 aa18.83■□□□□ 0.6
ACTN1-220ENST00000556433 AQP11Q8NBQ7 271 aa18.83■□□□□ 0.6
ACTN1-220ENST00000556433 ADAT1Q9BUB4 502 aaKnown RBP18.83■□□□□ 0.6
ACTN1-220ENST00000556433 COMMD3-BMI1R4GMX3 469 aa18.83■□□□□ 0.6
ACTN1-220ENST00000556433 TRAV40A0A0B4J280 105 aa18.82■□□□□ 0.6
ACTN1-220ENST00000556433 CLDN34H7C241 214 aa18.82■□□□□ 0.6
ACTN1-220ENST00000556433 ZNF593O00488 134 aaPredicted RBP18.82■□□□□ 0.6
ACTN1-220ENST00000556433 PHYHO14832 338 aa18.82■□□□□ 0.6
ACTN1-220ENST00000556433 GYPBP06028 91 aa18.82■□□□□ 0.6
ACTN1-220ENST00000556433 PSMB10P40306 273 aa18.82■□□□□ 0.6
ACTN1-220ENST00000556433 MAGEA2P43356 314 aa18.82■□□□□ 0.6
ACTN1-220ENST00000556433 ENTPD1P49961 510 aa18.82■□□□□ 0.6
ACTN1-220ENST00000556433 MNAT1P51948 309 aa18.82■□□□□ 0.6
ACTN1-220ENST00000556433 FGF12P61328 243 aa18.82■□□□□ 0.6
ACTN1-220ENST00000556433 CRMP1Q14194 572 aa18.82■□□□□ 0.6
ACTN1-220ENST00000556433 SHISA2Q6UWI4 295 aa18.82■□□□□ 0.6
ACTN1-220ENST00000556433 OR4Q3Q8NH05 313 aa18.82■□□□□ 0.6
ACTN1-220ENST00000556433 SLAMF6Q96DU3 332 aa18.82■□□□□ 0.6
ACTN1-220ENST00000556433 KCNJ15Q99712 375 aa18.82■□□□□ 0.6
ACTN1-220ENST00000556433 MMADHCQ9H3L0 296 aaPredicted RBP18.82■□□□□ 0.6
ACTN1-220ENST00000556433 MRPL15Q9P015 296 aaKnown RBP18.82■□□□□ 0.6
ACTN1-220ENST00000556433 B2RBV5 119 aa18.81■□□□□ 0.6
ACTN1-220ENST00000556433 LGALS8O00214 317 aa18.81■□□□□ 0.6
ACTN1-220ENST00000556433 PTBP3O95758 552 aaKnown RBP18.81■□□□□ 0.6
ACTN1-220ENST00000556433 SLC2A1P11166 492 aa18.81■□□□□ 0.6
ACTN1-220ENST00000556433 KCNJ8Q15842 424 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms