RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 CDC20BQ86Y33 519 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 ARRDC1Q8N5I2 433 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 CLEC1AQ8NC01 280 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 OR51A4Q8NGJ6 313 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 OR2G3Q8NGZ4 309 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 FAM174AQ8TBP5 190 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 TMEM184BQ9Y519 407 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 A0A1B0GX78 115 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF705GA8MUZ8 300 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 HBE1P02100 147 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 CAPZBP47756 277 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 SRYQ05066 204 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 ATPAF1Q5TC12 328 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 AKR1E2Q96JD6 320 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 PAPOLGQ9BWT3 736 aaKnown RBP13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 SEMA7AO75326 666 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 OR2C1O95371 312 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 QDPRP09417 244 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 RAB13P51153 203 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 TMEM240Q5SV17 173 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 THEM4Q5T1C6 240 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 MARVELD3Q96A59 401 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 PEBP1P30086 187 aaKnown RBP13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 PCK2Q16822 640 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 HIST2H3AQ71DI3 136 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 GVQW1Q8N7I0 195 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZPLD1Q8TCW7 415 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 CHST6Q9GZX3 395 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 IFNA4P05014 189 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 VSIG10L2P0DP72 767 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 FOLR1P15328 257 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 PNLIPRP2P54317 469 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 OR1D5P58170 312 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 MRPS34P82930 218 aaKnown RBP13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 MRGPREQ86SM8 312 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF100Q8IYN0 542 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 FAM96BQ9Y3D0 163 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 TO15178 435 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 EFNB2P52799 333 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 GFERP55789 205 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 FMODQ06828 376 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 MESTQ5EB52 335 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 MKXQ8IYA7 352 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF561Q8N587 486 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 SLC38A9Q8NBW4 561 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 OR4D10Q8NGI6 311 aa13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 ANKRD9Q96BM1 317 aaPredicted RBP13.51□□□□□ -0.25
ARHGEF40-207ENST00000556399 TMEM218A2RU14 115 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 SCRG1O75711 98 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 CD37P11049 281 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 DUSP1P28562 367 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 ST8SIA1Q92185 356 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 MALSU1Q96EH3 234 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 PLEKHA2Q9HB19 425 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 A0A1W2PNR3 127 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 TTLL8A6PVC2 850 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 MOSPD3O75425 235 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 ARF1P84077 181 aaKnown RBP13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 MESP2Q0VG99 397 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 INPP5JQ15735 1006 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 SLC16A14Q7RTX9 510 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 WDR5BQ86VZ2 330 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 APOBEC4Q8WW27 367 aaKnown RBP13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF707Q96C28 371 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 GPR173Q9NS66 373 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 KCNIP1Q9NZI2 227 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 OR6C76A6NM76 312 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 PPP1R2P9O14990 202 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 IFNA10P01566 189 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 CSNK1EP49674 416 aaKnown RBP13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 DUSP3P51452 185 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF684Q5T5D7 378 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 DCAF12L2Q5VW00 463 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 RPUSD3Q6P087 351 aaKnown RBP13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 STPG2Q8N412 459 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 SFT2D1Q8WV19 159 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 C11orf40Q8WZ69 217 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 ICAM5Q9UMF0 924 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 RLFQ13129 1914 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 TMEM229AB2RXF0 380 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 HSPB6O14558 160 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 NXPH3O95157 252 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 DUS4LO95620 317 aaKnown RBP13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 CTLA4P16410 223 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 OPRM1P35372 400 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 SRSF5Q13243 272 aaKnown RBP13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 ARHGEF39Q8N4T4 335 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 FGF14Q92915 247 aa13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 PTRH2Q9Y3E5 179 aaKnown RBP13.5□□□□□ -0.25
ARHGEF40-207ENST00000556399 E5RGE8 158 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 ABOP16442 354 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 MSX1P28360 303 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 FAM199XQ6PEV8 388 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 OVCH2Q7RTZ1 564 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZMIZ1Q9ULJ6 1067 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 NSG2Q9Y328 171 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 FTCDNL1E5RQL4 147 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 808.1 ms