RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 J3QRE1 110 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 NDUFS8O00217 210 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 CASQ2O14958 399 aaPredicted RBP8.2□□□□□ -1.1
SRP54-210ENST00000556380 RP2O75695 350 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 LYNP07948 512 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 CSF3P09919 207 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 SBK2P0C263 348 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 LYNX1P0DP58 116 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 HTR1FP30939 366 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 PDLIM4P50479 330 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 ZNF81P51508 661 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 CDC42P60953 191 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 RPS7P62081 194 aaKnown RBP8.2□□□□□ -1.1
SRP54-210ENST00000556380 GRB2P62993 217 aaKnown RBP8.2□□□□□ -1.1
SRP54-210ENST00000556380 ROM1Q03395 351 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 ZNF92Q03936 586 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 TMED1Q13445 227 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 RIN1Q13671 783 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 OCLNQ16625 522 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 PCGF3Q3KNV8 242 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 SPRNQ5BIV9 151 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 FAM209AQ5JX71 171 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 LCN1P1Q5VSP4 162 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 LPCAT4Q643R3 524 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 DEGS2Q6QHC5 323 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 CLEC2AQ6UVW9 174 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 GID4Q8IVV7 300 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 RHOXF1Q8NHV9 184 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 THEM6Q8WUY1 208 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 FAM168AQ92567 244 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 YIPF5Q969M3 257 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 SPSB4Q96A44 273 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 SGK3Q96BR1 496 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 RDH12Q96NR8 316 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 CNN2Q99439 309 aaKnown RBP8.2□□□□□ -1.1
SRP54-210ENST00000556380 RHNO1Q9BSD3 238 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 MSL2Q9HCI7 577 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 MYOZ1Q9NP98 299 aaPredicted RBP8.2□□□□□ -1.1
SRP54-210ENST00000556380 C8orf4Q9NR00 106 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 CYSLTR2Q9NS75 346 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 FAM118AQ9NWS6 357 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 DNAJC27Q9NZQ0 273 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 H2AFY2Q9P0M6 372 aaPredicted RBP8.2□□□□□ -1.1
SRP54-210ENST00000556380 NKX1-2Q9UD57 310 aaPredicted RBP8.2□□□□□ -1.1
SRP54-210ENST00000556380 CGGBP1Q9UFW8 167 aaPredicted RBP8.2□□□□□ -1.1
SRP54-210ENST00000556380 WARS2Q9UGM6 360 aaKnown RBP8.2□□□□□ -1.1
SRP54-210ENST00000556380 FN1P02751 2386 aaKnown RBP8.2□□□□□ -1.1
SRP54-210ENST00000556380 JMJD1CQ15652 2540 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 LOC100130705A0A1B0GUX0 176 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 ERICH4A6NGS2 130 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 IQCF6A8MYZ5 107 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 SPRY3O43610 288 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 TIMM8AO60220 97 aaPredicted RBP8.19□□□□□ -1.1
SRP54-210ENST00000556380 ENTPD6O75354 484 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 RGS9O75916 674 aaPredicted RBP8.19□□□□□ -1.1
SRP54-210ENST00000556380 APOC1P02654 83 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 ERCC1P07992 297 aaPredicted RBP8.19□□□□□ -1.1
SRP54-210ENST00000556380 CD55P08174 381 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 MRPL3P09001 348 aaKnown RBP8.19□□□□□ -1.1
SRP54-210ENST00000556380 INHBBP09529 407 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 H2BFMP0C1H6 154 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 SLC2A1P11166 492 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 SLC25A16P16260 332 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 PEX2P28328 305 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 CRYBB2P43320 205 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 NR4A2P43354 598 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 CX3CR1P49238 355 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 ZNF121P58317 390 aaPredicted RBP8.19□□□□□ -1.1
SRP54-210ENST00000556380 KRTAP1-1Q07627 177 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 TAF13Q15543 124 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 TRIP10Q15642 601 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 GLYATL3Q5SZD4 288 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 OGFRL1Q5TC84 451 aaPredicted RBP8.19□□□□□ -1.1
SRP54-210ENST00000556380 GALNT4Q8N4A0 578 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 RFLNBQ8N5W9 214 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 PACRGLQ8N7B6 248 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 ZNF283Q8N7M2 679 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 MAPK1IP1LQ8NDC0 245 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 OR8G5Q8NG78 346 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 FAM81AQ8TBF8 368 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 SNX33Q8WV41 574 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 RDH5Q92781 318 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 MNTQ99583 582 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 SMR3AQ99954 134 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 SLC30A2Q9BRI3 323 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 GSX1Q9H4S2 264 aaPredicted RBP8.19□□□□□ -1.1
SRP54-210ENST00000556380 CLN6Q9NWW5 311 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 AASSQ9UDR5 926 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 LAMP5Q9UJQ1 280 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 ZDHHC8Q9ULC8 765 aa8.19□□□□□ -1.1
SRP54-210ENST00000556380 CHD3Q12873 2000 aaKnown RBP8.19□□□□□ -1.1
SRP54-210ENST00000556380 PLSCR5A0PG75 271 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 CD300LBA8K4G0 201 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 SMAD7O15105 426 aaKnown RBP8.18□□□□□ -1.1
SRP54-210ENST00000556380 ZNF254O75437 659 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 SRSF10O75494 262 aaKnown RBP8.18□□□□□ -1.1
SRP54-210ENST00000556380 MT-ND5P03915 603 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 ACHEP22303 614 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 DCTDP32321 178 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 SLC6A9P48067 706 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms