RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 L3HYPDHQ96EM0 354 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 OR10C1Q96KK4 312 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 JSRP1Q96MG2 331 aaPredicted RBP1.56□□□□□ -2.16
SCFD1-218ENST00000556256 OPALINQ96PE5 141 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 HSD17B10Q99714 261 aaKnown RBP1.56□□□□□ -2.16
SCFD1-218ENST00000556256 FOXC2Q99958 501 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 FGF23Q9GZV9 251 aaPredicted RBP1.56□□□□□ -2.16
SCFD1-218ENST00000556256 SLC38A10Q9HBR0 1119 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 AHSPQ9NZD4 102 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 PDP1Q9P0J1 537 aaPredicted RBP1.56□□□□□ -2.16
SCFD1-218ENST00000556256 COMMD3-BMI1R4GMX3 469 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 S4R3C0 116 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 TRAV40A0A0B4J280 105 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 IGHV1-69DA0A0B4J2H0 117 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 IGHV7-4-1A0A0J9YVY3 117 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 LRRIQ4A6NIV6 560 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 SERPINE3A8MV23 424 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 H0YIV9 168 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 NMT2O60551 498 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 SLC22A5O76082 557 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 GLSO94925 669 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-218ENST00000556256 RCBTB2O95199 551 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 IFNW1P05000 195 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 POLR2MP0CAP2 368 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 UBCP0CG48 685 aaKnown RBP1.55□□□□□ -2.16
SCFD1-218ENST00000556256 CELP19835 753 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 IL32P24001 234 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 CD70P32970 193 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 RFC3P40938 356 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 SLC1A2P43004 574 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 RAD51Q06609 339 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 SPAG1Q07617 926 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 ART3Q13508 389 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 DGCR6Q14129 220 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 H3F3CQ6NXT2 135 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 ZFP1Q6P2D0 407 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 WDR82Q6UXN9 313 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 MICU2Q8IYU8 434 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 GATSQ8NAP1 163 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 OR52P1PQ8NH57 321 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 OR51F2Q8NH61 342 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 LILRB4Q8NHJ6 448 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 DOK1Q99704 481 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 GGTLC1Q9BX51 225 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 SLIRPQ9GZT3 109 aaKnown RBP1.55□□□□□ -2.16
SCFD1-218ENST00000556256 C1orf198Q9H425 327 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 TMEM27Q9HBJ8 222 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 MRM3Q9HC36 420 aaKnown RBP1.55□□□□□ -2.16
SCFD1-218ENST00000556256 SLC39A1Q9NY26 324 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 MYEF2Q9P2K5 600 aaKnown RBP1.55□□□□□ -2.16
SCFD1-218ENST00000556256 MARCOQ9UEW3 520 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-218ENST00000556256 SIGLEC9Q9Y336 463 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 WDR19Q8NEZ3 1342 aa1.55□□□□□ -2.16
SCFD1-218ENST00000556256 IGKV1-27A0A075B6S5 117 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 TRAV6A0A075B6T7 132 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 A0A1W2PRD5 423 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 C7orf66A4D0T2 115 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF850A8MQ14 1090 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 A8MUU9 505 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 ANKRD65E5RJM6 399 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 GOLGA8TH3BQL2 631 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 TNFRSF11BO00300 401 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 CASC3O15234 703 aaKnown RBP1.54□□□□□ -2.16
SCFD1-218ENST00000556256 RRP8O43159 456 aaKnown RBP1.54□□□□□ -2.16
SCFD1-218ENST00000556256 IGHV3-11P01762 117 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 GABRG2P18507 467 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 POLR2IP36954 125 aaKnown RBP1.54□□□□□ -2.16
SCFD1-218ENST00000556256 MYCNOSP40205 109 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 PPICP45877 212 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 NDUFA8P51970 172 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 CLDN8P56748 225 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 TAS2R31P59538 309 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 SIGLEC14Q08ET2 396 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF266Q14584 549 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 SNRNP35Q16560 246 aaKnown RBP1.54□□□□□ -2.16
SCFD1-218ENST00000556256 SPANXA2-OT1Q8N9U9 137 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 LRRC75AQ8NAA5 344 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 GPR26Q8NDV2 337 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 SLC25A46Q96AG3 418 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 SGTBQ96EQ0 304 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 RNF157Q96PX1 679 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 RBBP8Q99708 897 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 UQCC2Q9BRT2 126 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF2Q9BSG1 426 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-218ENST00000556256 OSBPL11Q9BXB4 747 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 PIGUQ9H490 435 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 CD209Q9NNX6 404 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 MYOZ1Q9NP98 299 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-218ENST00000556256 YARS2Q9Y2Z4 477 aaKnown RBP1.54□□□□□ -2.16
SCFD1-218ENST00000556256 CAB39Q9Y376 341 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-218ENST00000556256 DOCK9Q9BZ29 2069 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 CABIN1Q9Y6J0 2220 aa1.54□□□□□ -2.16
SCFD1-218ENST00000556256 IGLV2-18A0A075B6J9 118 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 IGLV3-12A0A075B6K2 115 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 SMIM26A0A096LP01 95 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 TRAV19A0A0A6YYK7 116 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 GOLGA6L7A0A1B0GV03 622 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 GABRR3A8MPY1 467 aa1.53□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF99A8MXY4 864 aaPredicted RBP1.53□□□□□ -2.16
SCFD1-218ENST00000556256 SUPT3HB4E1H0 165 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms