RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 LAMP5Q9UJQ1 280 aa12.87□□□□□ -0.35
ACTN1-217ENST00000556203 LOC100289279A0A1B0GTE1 492 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 GGT3PA6NGU5 568 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 CD300LBA8K4G0 201 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 H0YL77 283 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 APOC1P02654 83 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 ALPLP05186 524 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 TNFRSF1AP19438 455 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 ALOX5APP20292 161 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 HCCSP53701 268 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 ZNF121P58317 390 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-217ENST00000556203 MEPCEQ7L2J0 689 aaKnown RBP12.86□□□□□ -0.35
ACTN1-217ENST00000556203 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-217ENST00000556203 CBR4Q8N4T8 237 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 CLDND2Q8NHS1 167 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 TIMD4Q96H15 378 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 POM121Q96HA1 1249 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 OR2V2Q96R30 315 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 CNN2Q99439 309 aaKnown RBP12.86□□□□□ -0.35
ACTN1-217ENST00000556203 REPIN1Q9BWE0 567 aaKnown RBP12.86□□□□□ -0.35
ACTN1-217ENST00000556203 YIPF3Q9GZM5 350 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 BRD7Q9NPI1 651 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 USE1Q9NZ43 259 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 IL19Q9UHD0 177 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 WIPI2Q9Y4P8 454 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 ORC6Q9Y5N6 252 aa12.86□□□□□ -0.35
ACTN1-217ENST00000556203 ABCA1O95477 2261 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 SLC22A31A6NKX4 558 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 MLNRO43193 412 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 XRCC2O43543 280 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 HLA-DPB1P04440 258 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 RBMXP38159 391 aaKnown RBP12.85□□□□□ -0.35
ACTN1-217ENST00000556203 ALDH3A2P51648 485 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 SLC3A1Q07837 685 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 LRRN1Q6UXK5 716 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 FAM57BQ71RH2 274 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 PRSS45Q7RTY3 260 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 KRT77Q7Z794 578 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 GID4Q8IVV7 300 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 PQLC1Q8N2U9 271 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 RAB1CQ92928 201 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 MEGF10Q96KG7 1140 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 SP140LQ9H930 580 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 TMEM106BQ9NUM4 274 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 DCAF16Q9NXF7 216 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 COPS3Q9UNS2 423 aa12.85□□□□□ -0.35
ACTN1-217ENST00000556203 HIVEP2P31629 2446 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 FN1P02751 2386 aaKnown RBP12.84□□□□□ -0.35
ACTN1-217ENST00000556203 IGHV3-64DA0A0J9YX35 117 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 F5H5P2 479 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 PSMD9O00233 223 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 BAG2O95816 211 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 TGFAP01135 160 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 SRP9P49458 86 aaKnown RBP12.84□□□□□ -0.35
ACTN1-217ENST00000556203 RAD23AP54725 363 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 TIGD6Q17RP2 521 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 ZIK1Q3SY52 487 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-217ENST00000556203 FAM166AQ6J272 317 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 LINC01356Q8N9X3 169 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 OR56B2PQ8NGI1 322 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 OR52H1Q8NGJ2 320 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 STMN2Q93045 179 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 SPSB4Q96A44 273 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 SGK3Q96BR1 496 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 REEP6Q96HR9 211 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 PGAM5Q96HS1 289 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 OR10A2Q9H208 303 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 OPA3Q9H6K4 179 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 ADGRL4Q9HBW9 690 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 KCNS2Q9ULS6 477 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 LRP12Q9Y561 859 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 ZFHX3Q15911 3703 aa12.84□□□□□ -0.35
ACTN1-217ENST00000556203 A0A1B0GWJ7 208 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 ISPDA4D126 451 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 PRR32B1ATL7 298 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 LMX1BO60663 402 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 CRLF1O75462 422 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 CA6P23280 308 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 MMP16P51512 607 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 CDH15P55291 814 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 PSMA6P60900 246 aaKnown RBP12.83□□□□□ -0.36
ACTN1-217ENST00000556203 CDC42P60953 191 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 GFOD2Q3B7J2 385 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 ZNF771Q7L3S4 317 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-217ENST00000556203 PEG10Q86TG7 708 aaKnown RBP12.83□□□□□ -0.36
ACTN1-217ENST00000556203 OR8J1Q8NGP2 316 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 FAM81AQ8TBF8 368 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 ASB17Q8WXJ9 295 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 C1orf159Q96HA4 380 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 C9orf16Q9BUW7 83 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 MROQ9BYG7 248 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 TTTY10Q9BZA0 68 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 GCM1Q9NP62 436 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 HAO2Q9NYQ3 351 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 MRPL15Q9P015 296 aaKnown RBP12.83□□□□□ -0.36
ACTN1-217ENST00000556203 ZNF319Q9P2F9 582 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 PPP1R3CQ9UQK1 317 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 NPTNQ9Y639 398 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 TMEM14AQ9Y6G1 99 aa12.83□□□□□ -0.36
ACTN1-217ENST00000556203 CHD3Q12873 2000 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms