RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 ZNF48Q96MX3 618 aaPredicted RBP6.5□□□□□ -1.37
PTCSC3-201ENST00000556013 CDRT15Q96T59 188 aa6.5□□□□□ -1.37
PTCSC3-201ENST00000556013 FN3KRPQ9HA64 309 aa6.5□□□□□ -1.37
PTCSC3-201ENST00000556013 RPRD1BQ9NQG5 326 aaKnown RBP6.5□□□□□ -1.37
PTCSC3-201ENST00000556013 MRPL22Q9NWU5 206 aaKnown RBP6.5□□□□□ -1.37
PTCSC3-201ENST00000556013 ERVK-18Q9QC07 812 aa6.5□□□□□ -1.37
PTCSC3-201ENST00000556013 RNF7Q9UBF6 113 aa6.5□□□□□ -1.37
PTCSC3-201ENST00000556013 KAAG1Q9UBP8 84 aa6.5□□□□□ -1.37
PTCSC3-201ENST00000556013 MGAM2Q2M2H8 2515 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 TRAV38-1A0A0B4J264 116 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 DNAJC9-AS1A6NH13 148 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 F5H5P2 479 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 LGALS8O00214 317 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 P2RY10O00398 339 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 BHLHE40O14503 412 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 GPR37O15354 613 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 TMPRSS2O15393 492 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 ENSAO43768 121 aaKnown RBP6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 GPANK1O95872 356 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 CYB5R3P00387 301 aaPredicted RBP6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 LHBP01229 141 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 HLA-DQA2P01906 255 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 RRM2P31350 389 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 FMO3P31513 532 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 CFHR2P36980 270 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 MAGEA2P43356 314 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 SLC15A1P46059 708 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 PITPNBP48739 271 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 SLC25A1P53007 311 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 SNCBQ16143 134 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 CLEC12AQ5QGZ9 265 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 PGBD2Q6P3X8 592 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 C16orf89Q6UX73 402 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 CFAP77Q6ZQR2 320 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 MRPL21Q7Z2W9 205 aaKnown RBP6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 NAA40Q86UY6 237 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 ZDHHC21Q8IVQ6 265 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 BCL6BQ8N143 479 aaPredicted RBP6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 LNX2Q8N448 690 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 FAM86B1Q8N7N1 296 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 OR10AD1Q8NGE0 317 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 SPSB4Q96A44 273 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 MAP6Q96JE9 813 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 C1orf147Q96MC9 270 aaPredicted RBP6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 KCNJ15Q99712 375 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 NUDT16L1Q9BRJ7 211 aaKnown RBP6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 MUC13Q9H3R2 512 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 TOR3AQ9H497 397 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 RNPEPL1Q9HAU8 725 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 ACTR3BQ9P1U1 418 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 KIF17Q9P2E2 1029 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 TAGLN3Q9UI15 199 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 POMT1Q9Y6A1 747 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 CDH10Q9Y6N8 788 aa6.49□□□□□ -1.37
PTCSC3-201ENST00000556013 TENM1Q9UKZ4 2725 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 SRRM5B3KS81 715 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 ZNF879B4DU55 563 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 TNFRSF11BO00300 401 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 XRCC2O43543 280 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 FAM20BO75063 409 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 TIPRLO75663 272 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 HLA-DPB1P04440 258 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 IGHV4-38-2P0DP08 117 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 MUC1P15941 1255 aaPredicted RBP6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 HOXB6P17509 224 aaKnown RBP6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 CFL1P23528 166 aaKnown RBP6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 GRK5P34947 590 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 GRB2P62993 217 aaKnown RBP6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 ZNF92Q03936 586 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 OR8G1Q15617 311 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 GPR157Q5UAW9 335 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 TEX36Q5VZQ5 186 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 OTPQ5XKR4 325 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 ZNF770Q6IQ21 691 aaPredicted RBP6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 CD300LDQ6UXZ3 194 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 Q6YL49 198 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 PIGWQ7Z7B1 504 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 CPLX4Q7Z7G2 160 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 LINC00346Q8IVM7 164 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 RNF148Q8N7C7 305 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 PNLDC1Q8NA58 520 aaKnown RBP6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 BHLHE23Q8NDY6 225 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 SDR9C7Q8NEX9 313 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 OR10S1Q8NGN2 331 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 NPRL2Q8WTW4 380 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 DGCR6LQ9BY27 220 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 NMNAT2Q9BZQ4 307 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 MAGIXQ9H6Y5 334 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 UNKLQ9H9P5 680 aaKnown RBP6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 C14orf119Q9NWQ9 140 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 PCDHGB1Q9Y5G3 927 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 LYVE1Q9Y5Y7 322 aa6.48□□□□□ -1.37
PTCSC3-201ENST00000556013 OOEPA6NGQ2 149 aa6.47□□□□□ -1.37
PTCSC3-201ENST00000556013 GGT3PA6NGU5 568 aa6.47□□□□□ -1.37
PTCSC3-201ENST00000556013 ZNF878C9JN71 531 aa6.47□□□□□ -1.37
PTCSC3-201ENST00000556013 ZNF593O00488 134 aaPredicted RBP6.47□□□□□ -1.37
PTCSC3-201ENST00000556013 ARPC2O15144 300 aa6.47□□□□□ -1.37
PTCSC3-201ENST00000556013 DCTN3O75935 186 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms