RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 NDUFA13Q9P0J0 144 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 ZNF391Q9UJN7 358 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 STUB1Q9UNE7 303 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 SSR3Q9UNL2 185 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 SPEF1Q9Y4P9 236 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 IGHV2OR16-5A0A0B4J2B6 119 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 A0A1B0GVI7 797 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 SMIM31A0A1B0GVY4 71 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 LOC107986453A0A1B0GWG9 222 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 DPPA5A6NC42 116 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 CCDC160A6NGH7 325 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 J3QW42 95 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 P2RY10O00398 339 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 CASKO14936 926 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 XRCC2O43543 280 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 SYT7O43581 403 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 AIREO43918 545 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 ICMTO60725 284 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 RGS9O75916 674 aaPredicted RBP9.54□□□□□ -0.88
TMEM260-208ENST00000555905 ATE1O95260 518 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 ZNF35P13682 527 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 CFL1P23528 166 aaKnown RBP9.54□□□□□ -0.88
TMEM260-208ENST00000555905 GADD45AP24522 165 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 PTAFRP25105 342 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 CD40P25942 277 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 WNT5AP41221 380 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 RAD52P43351 418 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 UCP2P55851 309 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 SNAI3Q3KNW1 292 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 SEZ6L2Q6UXD5 910 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 COLCA1Q6ZS62 124 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 C22orf34Q6ZV56 151 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 DOK3Q7L591 496 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 CLVS1Q8IUQ0 354 aaPredicted RBP9.54□□□□□ -0.88
TMEM260-208ENST00000555905 C1orf174Q8IYL3 243 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 RDH10Q8IZV5 341 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 LINC01560Q8TB33 94 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 ABHD4Q8TB40 342 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 TSEN15Q8WW01 171 aaKnown RBP9.54□□□□□ -0.88
TMEM260-208ENST00000555905 AKAP1Q92667 903 aaKnown RBP eCLIP9.54□□□□□ -0.88
TMEM260-208ENST00000555905 THRSPQ92748 146 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 REEP6Q96HR9 211 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 DACH2Q96NX9 599 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 ESRP2Q9H6T0 727 aaKnown RBP9.54□□□□□ -0.88
TMEM260-208ENST00000555905 GPR84Q9NQS5 396 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 ZNF319Q9P2F9 582 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 HHLA2Q9UM44 414 aa9.54□□□□□ -0.88
TMEM260-208ENST00000555905 SF3B6Q9Y3B4 125 aaKnown RBP9.54□□□□□ -0.88
TMEM260-208ENST00000555905 HEATR1Q9H583 2144 aaKnown RBP9.53□□□□□ -0.88
TMEM260-208ENST00000555905 RELNP78509 3460 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 LOC100506127A0A0U1RQW1 187 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 WIPF3A6NGB9 483 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 H3BSA7 217 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 J3QKU1 62 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 SMPD2O60906 423 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 MTRF1O75570 445 aaKnown RBP9.53□□□□□ -0.88
TMEM260-208ENST00000555905 OCM2P0CE71 109 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 FAM157BP0CG42 384 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 EPXP11678 715 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 PLA2G2AP14555 144 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 ZNF12P17014 697 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 GALP22466 123 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 TUBG1P23258 451 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 MAPK3P27361 379 aaPredicted RBP9.53□□□□□ -0.88
TMEM260-208ENST00000555905 KIR2DL3P43628 341 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 TMBIM6P55061 237 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 FABP5Q01469 135 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 SNTB1Q13884 538 aaKnown RBP9.53□□□□□ -0.88
TMEM260-208ENST00000555905 ACSM3Q53FZ2 586 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 GLYATL3Q5SZD4 288 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 PAMR1Q6UXH9 720 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 GDPGP1Q6ZNW5 385 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 MRPL21Q7Z2W9 205 aaKnown RBP9.53□□□□□ -0.88
TMEM260-208ENST00000555905 CEACAM19Q7Z692 300 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 ANKRD13BQ86YJ7 626 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 ZNF101Q8IZC7 436 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 CCDC54Q8NEL0 328 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 OR13C3Q8NGS6 347 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 SGK3Q96BR1 496 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 FAM71F1Q96KD3 344 aaPredicted RBP9.53□□□□□ -0.88
TMEM260-208ENST00000555905 CHCHD6Q9BRQ6 235 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 BCL2L14Q9BZR8 327 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 OR51E2Q9H255 320 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 OR51B6Q9H340 312 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 OPA3Q9H6K4 179 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 EXOSC4Q9NPD3 245 aaKnown RBP9.53□□□□□ -0.88
TMEM260-208ENST00000555905 TUBG2Q9NRH3 451 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 ENPP5Q9UJA9 477 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 DHDHQ9UQ10 334 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 STARD10Q9Y365 291 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 RTTNQ86VV8 2226 aa9.53□□□□□ -0.88
TMEM260-208ENST00000555905 TRDV1A0A1B0GX56 115 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 C5orf63A6NC05 138 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 ZNF879B4DU55 563 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 H3BSH0 61 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 GABRPO00591 440 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 GATBO75879 557 aaKnown RBP9.52□□□□□ -0.89
TMEM260-208ENST00000555905 GABARAPO95166 117 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 NGFP01138 241 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 CD2P06729 351 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms