RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 PKDREJQ9NTG1 2253 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 TENM4Q6N022 2769 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 TRBV2A0A0J9YWF9 115 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 TMEM212A6NML5 194 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 TBX1O43435 398 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 PLPP2O43688 288 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 CTAG2O75638 210 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 TTRP02766 147 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 ISG15P05161 165 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 RAC2P15153 192 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 ATP6V1B1P15313 513 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 CD53P19397 219 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 GCH1P30793 250 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 THBS4P35443 961 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 GTF2A1P52655 376 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-221ENST00000555773 SELENOVP59797 346 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 NANOS3P60323 173 aaKnown RBP10.73□□□□□ -0.69
SHMT2-221ENST00000555773 MFGE8Q08431 387 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-221ENST00000555773 SPOCK1Q08629 439 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 MLLT11Q13015 90 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-221ENST00000555773 TPBGQ13641 420 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 CDK5R1Q15078 307 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 MOGQ16653 247 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 TIGD6Q17RP2 521 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 SNAI3Q3KNW1 292 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 ZNF672Q499Z4 452 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-221ENST00000555773 WDR38Q5JTN6 314 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 MBNL2Q5VZF2 373 aaKnown RBP10.73□□□□□ -0.69
SHMT2-221ENST00000555773 DMKNQ6E0U4 476 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-221ENST00000555773 RGS7BPQ6MZT1 257 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-221ENST00000555773 KCTD8Q6ZWB6 473 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 RFPL4BQ6ZWI9 263 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 PRSS35Q8N3Z0 413 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 OR8B12Q8NGG6 310 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 SLC25A40Q8TBP6 338 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 RPS4Y2Q8TD47 263 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 TMEM171Q8WVE6 324 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 PPP1R14AQ96A00 147 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 HAVCR1Q96D42 359 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 C14orf79Q96F83 325 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 MARS2Q96GW9 593 aaKnown RBP10.73□□□□□ -0.69
SHMT2-221ENST00000555773 HS3ST6Q96QI5 342 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 MGLLQ99685 303 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 REPIN1Q9BWE0 567 aaKnown RBP10.73□□□□□ -0.69
SHMT2-221ENST00000555773 CA10Q9NS85 328 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 CISD1Q9NZ45 108 aaKnown RBP10.73□□□□□ -0.69
SHMT2-221ENST00000555773 ZNF319Q9P2F9 582 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 ST6GALNAC2Q9UJ37 374 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 SLC22A13Q9Y226 551 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 CMAHPQ9Y471 501 aa10.73□□□□□ -0.69
SHMT2-221ENST00000555773 LOC390937A0A1W2PQ73 354 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 OR4C45A6NMZ5 311 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 E7EQL1 145 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 GPRIN2O60269 458 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 MTRF1O75570 445 aaKnown RBP10.72□□□□□ -0.69
SHMT2-221ENST00000555773 LALBAP00709 142 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 UBCP0CG48 685 aaKnown RBP10.72□□□□□ -0.69
SHMT2-221ENST00000555773 HSMCR30P0CW71 290 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 ZNF250P15622 560 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 SELEP16581 610 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 ZNF12P17014 697 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 JUNBP17275 347 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-221ENST00000555773 APOBEC3AP31941 199 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-221ENST00000555773 DDOSTP39656 456 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 KIR3DL2P43630 455 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 EVX1P49640 407 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 GK2Q14410 553 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-221ENST00000555773 GLYATL3Q5SZD4 288 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 SYT6Q5T7P8 510 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-221ENST00000555773 XAF1Q6GPH4 301 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 PGAP1Q75T13 922 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 ZNF676Q8N7Q3 588 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 KBTBD8Q8NFY9 601 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 OR5AK2Q8NH90 309 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 LILRB1Q8NHL6 650 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-221ENST00000555773 SYNPRQ8TBG9 265 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 KLF14Q8TD94 323 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-221ENST00000555773 CMBLQ96DG6 245 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 SMIM19Q96E16 107 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 REEP6Q96HR9 211 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 DHRS9Q9BPW9 319 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 MRPS26Q9BYN8 205 aaKnown RBP10.72□□□□□ -0.69
SHMT2-221ENST00000555773 OR2J1Q9GZK6 312 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 COMMD4Q9H0A8 199 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 OR51B6Q9H340 312 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 SIRT4Q9Y6E7 314 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-221ENST00000555773 GCN1Q92616 2671 aaKnown RBP10.72□□□□□ -0.69
SHMT2-221ENST00000555773 ROS1P08922 2347 aa10.72□□□□□ -0.69
SHMT2-221ENST00000555773 A0A1B0GVI7 797 aa10.71□□□□□ -0.69
SHMT2-221ENST00000555773 C5orf63A6NC05 138 aa10.71□□□□□ -0.69
SHMT2-221ENST00000555773 ZFPL1O95159 310 aa10.71□□□□□ -0.69
SHMT2-221ENST00000555773 PLAUP00749 431 aa10.71□□□□□ -0.69
SHMT2-221ENST00000555773 IGLV3-1P01715 115 aa10.71□□□□□ -0.69
SHMT2-221ENST00000555773 CPEP16870 476 aa10.71□□□□□ -0.69
SHMT2-221ENST00000555773 CELP19835 753 aa10.71□□□□□ -0.69
SHMT2-221ENST00000555773 CCL1P22362 96 aa10.71□□□□□ -0.69
SHMT2-221ENST00000555773 COL8A1P27658 744 aa10.71□□□□□ -0.69
SHMT2-221ENST00000555773 SSTR2P30874 369 aa10.71□□□□□ -0.69
SHMT2-221ENST00000555773 SERPINF1P36955 418 aa10.71□□□□□ -0.69
SHMT2-221ENST00000555773 FABP6P51161 128 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms