RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 CLUP10909 449 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 IRF2P14316 349 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 RPS2P15880 293 aaKnown RBP11.58□□□□□ -0.56
PCNX4-209ENST00000555569 CPT2P23786 658 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 PMELP40967 661 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 CD200P41217 278 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 GATA4P43694 442 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 ZNF92Q03936 586 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 ZNF154Q13106 437 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 MAB21L1Q13394 359 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 GK3PQ14409 553 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 TAF13Q15543 124 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 OR8G1Q15617 311 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 PCK2Q16822 640 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 TEX30Q5JUR7 227 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 CD300LDQ6UXZ3 194 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 OR6K6Q8NGW6 343 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 OR2AE1Q8NHA4 323 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 GIPC3Q8TF64 312 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 ERGIC1Q969X5 290 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 SLAMF6Q96DU3 332 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 NIPSNAP1Q9BPW8 284 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 THTPAQ9BU02 230 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 SLC22A4Q9H015 551 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 CMC2Q9NRP2 79 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 CENPMQ9NSP4 180 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 NOP16Q9Y3C1 178 aaKnown RBP11.58□□□□□ -0.56
PCNX4-209ENST00000555569 INSIG2Q9Y5U4 225 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 AUP1Q9Y679 476 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 ANK2Q01484 3957 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 GGT3PA6NGU5 568 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 ZNF878C9JN71 531 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 TRIM77I1YAP6 450 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 ACOT8O14734 319 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 FSTL3O95633 263 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 CST1P01037 141 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 ZNF3P17036 446 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 ANOS1P23352 680 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 FPR2P25090 351 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 PRKXP51817 358 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 BLVRAP53004 296 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 RAD23AP54725 363 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 ARMCX4Q5H9R4 360 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 FAM201AQ5SY85 155 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 GLYATL3Q5SZD4 288 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 C12orf54Q6X4T0 127 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 KLBQ86Z14 1044 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 ADGRG5Q8IZF4 528 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 OR11L1Q8NGX0 322 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 TEX47Q8TBZ9 253 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 Q8TCH9 128 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 FEVQ99581 238 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 KCNJ15Q99712 375 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 TMEM246Q9BRR3 403 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 MRI1Q9BV20 369 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 CHID1Q9BWS9 393 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 SSBP3Q9BWW4 388 aaPredicted RBP11.57□□□□□ -0.56
PCNX4-209ENST00000555569 MIOXQ9UGB7 285 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 OR5V1Q9UGF6 321 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 PPIAL4AQ9Y536 164 aa11.57□□□□□ -0.56
PCNX4-209ENST00000555569 C5orf63A6NC05 138 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 ARRDC5A6NEK1 342 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 AQP12BA6NM10 295 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 DYNC1I1O14576 645 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 FAM20BO75063 409 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 CA6P23280 308 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 GRK5P34947 590 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 GNB2P62879 340 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 ACTG1P63261 375 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 ZNF404Q494X3 552 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 LINC01590Q5TEZ4 76 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 PRAMEF6Q5VXH4 476 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 AQP12AQ8IXF9 295 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 IQCF1Q8N6M8 205 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 OR8B3Q8NGG8 313 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 FAM216AQ8WUB2 273 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 C22orf15Q8WYQ4 148 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 DVL3Q92997 716 aaPredicted RBP11.56□□□□□ -0.56
PCNX4-209ENST00000555569 NEIL1Q96FI4 390 aaPredicted RBP11.56□□□□□ -0.56
PCNX4-209ENST00000555569 PLEKHA8Q96JA3 519 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 OR8B2Q96RD0 313 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 ADAT1Q9BUB4 502 aaKnown RBP11.56□□□□□ -0.56
PCNX4-209ENST00000555569 MED20Q9H944 212 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 UFSP2Q9NUQ7 469 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 NUP50Q9UKX7 468 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 N6AMT1Q9Y5N5 214 aa11.56□□□□□ -0.56
PCNX4-209ENST00000555569 DHRS12A0PJE2 317 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 FAM183AA6NL82 134 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 H3BN98 237 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 GNGT2O14610 69 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 XRCC2O43543 280 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 GMDSO60547 372 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 SLC2A1P11166 492 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 HOXB6P17509 224 aaKnown RBP11.55□□□□□ -0.56
PCNX4-209ENST00000555569 SLC15A1P46059 708 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 GRB2P62993 217 aaKnown RBP11.55□□□□□ -0.56
PCNX4-209ENST00000555569 PAX8Q06710 450 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 EIF2B1Q14232 305 aaKnown RBP11.55□□□□□ -0.56
PCNX4-209ENST00000555569 MPPED2Q15777 294 aa11.55□□□□□ -0.56
PCNX4-209ENST00000555569 KLF17Q5JT82 389 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms