RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 RANBP3LQ86VV4 465 aaPredicted RBP2.57□□□□□ -2
SLIRP-202ENST00000553981 PTOV1Q86YD1 416 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 NKAIN4Q8IVV8 208 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 PDZD9Q8IXQ8 264 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 LRRC34Q8IZ02 419 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 PNKDQ8N490 385 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 NATD1Q8N6N6 113 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 SMYD1Q8NB12 490 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 ICA1LQ8NDH6 482 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 ADPRHL1Q8NDY3 354 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 OR52E2Q8NGJ4 325 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 OR6T1Q8NGN1 323 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 OR6X1Q8NH79 312 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 MOSPD2Q8NHP6 518 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 PFN4Q8NHR9 129 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 NFKBIDQ8NI38 313 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 ZNF519Q8TB69 540 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 GTF2H4Q92759 462 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 RAB39BQ96DA2 213 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 MAELQ96JY0 434 aaKnown RBP2.57□□□□□ -2
SLIRP-202ENST00000553981 C16orf45Q96MC5 204 aaPredicted RBP2.57□□□□□ -2
SLIRP-202ENST00000553981 OR52B2Q96RD2 323 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 PANX1Q96RD7 426 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 CCT8L2Q96SF2 557 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 ZNF607Q96SK3 696 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 RHOXF2Q9BQY4 288 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 TMEM246Q9BRR3 403 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 ZNF426Q9BUY5 554 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 ULBP2Q9BZM5 246 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 IQCGQ9H095 443 aaKnown RBP2.57□□□□□ -2
SLIRP-202ENST00000553981 PPP1R3EQ9H7J1 279 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 MEAF6Q9HAF1 191 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 TPT1P8Q9HAU6 139 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 HHATLQ9HCP6 504 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 BCL2L10Q9HD36 194 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 C20orf141Q9NUB4 165 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 ATAD3AQ9NVI7 634 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 MRPL39Q9NYK5 338 aaKnown RBP2.57□□□□□ -2
SLIRP-202ENST00000553981 ADA2Q9NZK5 511 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 VAPAQ9P0L0 249 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 ZNF346Q9UL40 294 aaKnown RBP2.57□□□□□ -2
SLIRP-202ENST00000553981 STARD10Q9Y365 291 aa2.57□□□□□ -2
SLIRP-202ENST00000553981 TET2Q6N021 2002 aaPredicted RBP2.56□□□□□ -2
SLIRP-202ENST00000553981 A0A0U1RQK1 487 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 KIR2DS1A0A191URI9 304 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 WI2-2373I1.2A0A1W2PRP0 233 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 C5orf49A4QMS7 147 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 KPNA4O00629 521 aaPredicted RBP2.56□□□□□ -2
SLIRP-202ENST00000553981 GPR137BO60478 399 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 SHOX2O60902 331 aaPredicted RBP2.56□□□□□ -2
SLIRP-202ENST00000553981 FOXH1O75593 365 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 UBL3O95164 117 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 RAB36O95755 333 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 CH25HO95992 272 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 HLA-DPB1P04440 258 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 ZCCHC18P0CG32 403 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 ADORA3P0DMS8 318 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 SELLP14151 372 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 ANPEPP15144 967 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 LBPP18428 481 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 NCF2P19878 526 aaPredicted RBP2.56□□□□□ -2
SLIRP-202ENST00000553981 PCMT1P22061 227 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 CCNOP22674 350 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 AHCYP23526 432 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 STOMP27105 288 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 LAP3P28838 519 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 AQP1P29972 269 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 S100A3P33764 101 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 CFHR2P36980 270 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 RPL3P39023 403 aaKnown RBP2.56□□□□□ -2
SLIRP-202ENST00000553981 AQP2P41181 271 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 CRATP43155 626 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 IER3P46695 156 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 CSNK1A1P48729 337 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 GZMMP51124 257 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 RAD23AP54725 363 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 UGT2B15P54855 530 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 KRTAP10-12P60413 245 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 ABCE1P61221 599 aaKnown RBP2.56□□□□□ -2
SLIRP-202ENST00000553981 FGF12P61328 243 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 NAA20P61599 178 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 PPP1CBP62140 327 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 BTG1P62324 171 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 TNFAIP6P98066 277 aaPredicted RBP2.56□□□□□ -2
SLIRP-202ENST00000553981 GALK2Q01415 458 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 RPL18Q07020 188 aaKnown RBP2.56□□□□□ -2
SLIRP-202ENST00000553981 BST1Q10588 318 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 COX10Q12887 443 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 KLRD1Q13241 179 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 PMS2P3Q13401 168 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 C1DQ13901 141 aaKnown RBP2.56□□□□□ -2
SLIRP-202ENST00000553981 RGNQ15493 299 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 MPPED2Q15777 294 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 FAM189A2Q15884 450 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 WHAMMP3Q1A5X7 153 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 HFEQ30201 348 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 TMEM155Q4W5P6 130 aa2.56□□□□□ -2
SLIRP-202ENST00000553981 CCDC92Q53HC0 331 aaPredicted RBP2.56□□□□□ -2
SLIRP-202ENST00000553981 CLEC12AQ5QGZ9 265 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms