RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 MFSD14CQ5VZR4 134 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 PPP1R2P3Q6NXS1 205 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 C8orf74Q6P047 294 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 WDR74Q6RFH5 385 aaPredicted RBP1.7□□□□□ -2.14
SRP54-204ENST00000553923 CXCL17Q6UXB2 119 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 WDR82Q6UXN9 313 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 UNQ9370/PRO34162Q6UXP9 181 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 FAM220AQ7Z4H9 259 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 ZNF589Q86UQ0 364 aaPredicted RBP1.7□□□□□ -2.14
SRP54-204ENST00000553923 ZNF677Q86XU0 584 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 RAB43Q86YS6 212 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 HIPK1Q86Z02 1210 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 C10orf107Q8IVU9 208 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 GPD1LQ8N335 351 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 ZNF786Q8N393 782 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 CHST4Q8NCG5 386 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 MDS2Q8NDY4 140 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 CCDC112Q8NEF3 446 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 CCDC54Q8NEL0 328 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 OR5T1Q8NG75 326 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 OR10G3Q8NGC4 313 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 OR8J2Q8NGG1 315 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 OR6Q1Q8NGQ2 317 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 ZFP90Q8TF47 636 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 FAM151AQ8WW52 585 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 FGGYQ96C11 551 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 CMTM5Q96DZ9 223 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 SGTBQ96EQ0 304 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 C1orf147Q96MC9 270 aaPredicted RBP1.7□□□□□ -2.14
SRP54-204ENST00000553923 GPR21Q99679 349 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 EBF4Q9BQW3 602 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 OSBPL11Q9BXB4 747 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 PARD6GQ9BYG4 376 aaPredicted RBP1.7□□□□□ -2.14
SRP54-204ENST00000553923 POTEKPQ9BYX7 375 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 DSN1Q9H410 356 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 REEP1Q9H902 201 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 EDA2RQ9HAV5 297 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 ACOT13Q9NPJ3 140 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 AIG1Q9NVV5 245 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 C1orf109Q9NX04 203 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 RHBDL2Q9NX52 303 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 IL20Q9NYY1 176 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 USE1Q9NZ43 259 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 MAT2BQ9NZL9 334 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 Q9UF83 564 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 CYB5R1Q9UHQ9 305 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 ZNF107Q9UII5 783 aaPredicted RBP1.7□□□□□ -2.14
SRP54-204ENST00000553923 FBXL3Q9UKT7 428 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 CES1P1Q9UKY3 287 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 VSIG4Q9Y279 399 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 PRG3Q9Y2Y8 225 aaPredicted RBP1.7□□□□□ -2.14
SRP54-204ENST00000553923 SNX24Q9Y343 169 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 FLVCR1Q9Y5Y0 555 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 STYXL1Q9Y6J8 313 aa1.7□□□□□ -2.14
SRP54-204ENST00000553923 ELP1O95163 1332 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 IGHV1OR15-1A0A075B7D0 117 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 A0A0B4J2A0 478 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 KIR2DS1A0A191URI9 304 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 FAM240AA0A1B0GVK7 77 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 TMEM213A2RRL7 107 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 TMEM210A6NLX4 147 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 GJE1A6NN92 205 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 GOLGA6L19H0YKK7 550 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 PLPP3O14495 311 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 KMOO15229 486 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 PHF1O43189 567 aaPredicted RBP1.69□□□□□ -2.14
SRP54-204ENST00000553923 ATP8B1O43520 1251 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 TRAPPC3O43617 180 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 MPZL2O60487 215 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 GALR3O60755 368 aaPredicted RBP1.69□□□□□ -2.14
SRP54-204ENST00000553923 DUSP14O95147 198 aaKnown RBP1.69□□□□□ -2.14
SRP54-204ENST00000553923 VENTXO95231 258 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 AHSA1O95433 338 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 RAB36O95755 333 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 OXTP01178 125 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 OCM2P0CE71 109 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 PGA5P0DJD9 388 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 OR5H8P0DN80 308 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 PSKH1P11801 424 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 IGFBP3P17936 291 aaPredicted RBP1.69□□□□□ -2.14
SRP54-204ENST00000553923 COX7A1P24310 79 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 F2RP25116 425 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 EVI2BP34910 448 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 GGT2P36268 569 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 ACTR1BP42025 376 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 CDKN2CP42773 168 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 KIR2DS4P43632 304 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 GALR1P47211 349 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 FABP6P51161 128 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 CEBPGP53567 150 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 AQP5P55064 265 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 VSX2P58304 361 aaPredicted RBP1.69□□□□□ -2.14
SRP54-204ENST00000553923 TAS2R19P59542 299 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 RHOAP61586 193 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 CACNG7P62955 275 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 RPS21P63220 83 aaKnown RBP1.69□□□□□ -2.14
SRP54-204ENST00000553923 IL5RAQ01344 420 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 HMGCS1Q01581 520 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 REG3AQ06141 175 aa1.69□□□□□ -2.14
SRP54-204ENST00000553923 TCP10Q12799 353 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms