RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 CD300LBA8K4G0 201 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 BHLHE40O14503 412 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 CCNB2O95067 398 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 IFNGP01579 166 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 CA6P23280 308 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 SLC15A1P46059 708 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 NPY4RP50391 375 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 BLVRAP53004 296 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 PRSS12P56730 875 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 MAB21L1Q13394 359 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 KLF17Q5JT82 389 aaPredicted RBP10.66□□□□□ -0.7
LINC00643-202ENST00000553426 CD276Q5ZPR3 534 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 CYP2R1Q6VVX0 501 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 RASSF6Q6ZTQ3 369 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 PLPP7Q8NBV4 271 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 UPRTQ96BW1 309 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 DUX5Q96PT3 197 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 NUDT16L1Q9BRJ7 211 aaKnown RBP10.66□□□□□ -0.7
LINC00643-202ENST00000553426 ADAT1Q9BUB4 502 aaKnown RBP10.66□□□□□ -0.7
LINC00643-202ENST00000553426 MMADHCQ9H3L0 296 aaPredicted RBP10.66□□□□□ -0.7
LINC00643-202ENST00000553426 OPA3Q9H6K4 179 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 TRIM36Q9NQ86 728 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 CENPMQ9NSP4 180 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 ARL8BQ9NVJ2 186 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 IL20Q9NYY1 176 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 MRPL15Q9P015 296 aaKnown RBP10.66□□□□□ -0.7
LINC00643-202ENST00000553426 ACTR3BQ9P1U1 418 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 ERVK-18Q9QC07 812 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 RNF7Q9UBF6 113 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 TVP23AA6NH52 213 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 CLDN34H7C241 214 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 NDUFA2O43678 99 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 ENSAO43768 121 aaKnown RBP10.65□□□□□ -0.7
LINC00643-202ENST00000553426 FAM20BO75063 409 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 GASTP01350 101 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 RNASE1P07998 156 aaKnown RBP10.65□□□□□ -0.7
LINC00643-202ENST00000553426 SPARCP09486 303 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 PMELP40967 661 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 ENTPD1P49961 510 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 BPIFB3P59826 476 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 GNGT1P63211 74 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 PAX2Q02962 417 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 DBPQ10586 325 aaPredicted RBP10.65□□□□□ -0.7
LINC00643-202ENST00000553426 OR8B8Q15620 311 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 FAM201AQ5SY85 155 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 PRAMEF6Q5VXH4 476 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 WDR25Q64LD2 544 aaPredicted RBP10.65□□□□□ -0.7
LINC00643-202ENST00000553426 SHISA2Q6UWI4 295 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 DCXRQ7Z4W1 244 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 BCL6BQ8N143 479 aaPredicted RBP10.65□□□□□ -0.7
LINC00643-202ENST00000553426 ARHGAP24Q8N264 748 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 LNX2Q8N448 690 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 AQP11Q8NBQ7 271 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 OR2T33Q8NG76 320 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 OR9Q2Q8NGE9 314 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 OR51L1Q8NGJ5 315 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 OR9Q1Q8NGQ5 310 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 ZDHHC16Q969W1 377 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 TECTBQ96PL2 329 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 KCNJ15Q99712 375 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 BTBD10Q9BSF8 475 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 TSSK6Q9BXA6 273 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 MUC13Q9H3R2 512 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 REEP1Q9H902 201 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 SP140LQ9H930 580 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 C14orf119Q9NWQ9 140 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 PCDHGB1Q9Y5G3 927 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 N6AMT1Q9Y5N5 214 aa10.65□□□□□ -0.7
LINC00643-202ENST00000553426 IGHV3OR16-10A0A075B7F0 116 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 TRAV38-1A0A0B4J264 116 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 TRAV40A0A0B4J280 105 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 RIIAD1A6NNX1 92 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 ZNF878C9JN71 531 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 ZNF593O00488 134 aaPredicted RBP10.64□□□□□ -0.71
LINC00643-202ENST00000553426 KCNAB3O43448 404 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 XRCC2O43543 280 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 APOC1P02654 83 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 LIPFP07098 398 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 IGHV4-38-2P0DP08 117 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 ZNF3P17036 446 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 DDOSTP39656 456 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 RPS27P42677 84 aaKnown RBP10.64□□□□□ -0.71
LINC00643-202ENST00000553426 PRKXP51817 358 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 IL13RA1P78552 427 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 ZNF92Q03936 586 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 TUSC1Q2TAM9 212 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 SNAI3Q3KNW1 292 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 FAM98BQ52LJ0 330 aaKnown RBP10.64□□□□□ -0.71
LINC00643-202ENST00000553426 GPR157Q5UAW9 335 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 C9orf139Q6ZV77 190 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 PIGWQ7Z7B1 504 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 DHFR2Q86XF0 187 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 BOLLQ8N9W6 283 aaKnown RBP10.64□□□□□ -0.71
LINC00643-202ENST00000553426 SLC37A3Q8NCC5 494 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 OR6K6Q8NGW6 343 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 OR2AE1Q8NHA4 323 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 SLAMF6Q96DU3 332 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 DDOQ99489 341 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 ZNF747Q9BV97 191 aa10.64□□□□□ -0.71
LINC00643-202ENST00000553426 MAGIXQ9H6Y5 334 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms