RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 PPP1R14AQ96A00 147 aa12.71□□□□□ -0.37
MTHFD1-204ENST00000553405 SGK3Q96BR1 496 aa12.71□□□□□ -0.37
MTHFD1-204ENST00000553405 PELI1Q96FA3 418 aa12.71□□□□□ -0.37
MTHFD1-204ENST00000553405 ALG8Q9BVK2 526 aa12.71□□□□□ -0.37
MTHFD1-204ENST00000553405 NUFIP1Q9UHK0 495 aaKnown RBP12.71□□□□□ -0.37
MTHFD1-204ENST00000553405 IKZF2Q9UKS7 526 aa12.71□□□□□ -0.37
MTHFD1-204ENST00000553405 R4GMQ9 66 aa12.71□□□□□ -0.37
MTHFD1-204ENST00000553405 OTOGQ6ZRI0 2925 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 TMEM269A0A1B0GVZ9 245 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 A0A1B0GWJ7 208 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 B9A039 149 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 E9PI62 339 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 APOC1P02654 83 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 KRT8P05787 483 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 CDK1P06493 297 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 KITLGP21583 273 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 SLC6A9P48067 706 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 NANOS3P60323 173 aaKnown RBP12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 TNK1Q13470 666 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 Q6ZSR3 168 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 FAM57BQ71RH2 274 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 KCTD20Q7Z5Y7 419 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 CATSPERDQ86XM0 798 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 OR52H1Q8NGJ2 320 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 OR2AE1Q8NHA4 323 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 RPS4Y2Q8TD47 263 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 HAVCR1Q96D42 359 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 LYZL4Q96KX0 146 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 COG8Q96MW5 612 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 SYT3Q9BQG1 590 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 SOX7Q9BT81 388 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 REPIN1Q9BWE0 567 aaKnown RBP12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 CBLN4Q9NTU7 201 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 PTTG3PQ9NZH4 202 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 ST6GALNAC2Q9UJ37 374 aa12.7□□□□□ -0.38
MTHFD1-204ENST00000553405 ZNF469Q96JG9 3925 aaPredicted RBP12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 A0A0U1RQV5 110 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 LILRA1O75019 489 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 LALBAP00709 142 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 TTRP02766 147 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 ANXA2P07355 339 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 RAC2P15153 192 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 PAX1P15863 534 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 KIR3DL2P43630 455 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 MMP15P51511 669 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 PRSS12P56730 875 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 ACTA2P62736 377 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 ACTG2P63267 376 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 ZNF718Q3SXZ3 478 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 RBM48Q5RL73 367 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 OR2G6Q5TZ20 316 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 UNQ6126/PRO20091Q6UXV3 157 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 FBXL14Q8N1E6 418 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 ZNF786Q8N393 782 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 YIPF7Q8N8F6 280 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 ZNF540Q8NDQ6 660 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 SYNPRQ8TBG9 265 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 SNX33Q8WV41 574 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 GTF3AQ92664 365 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 CMBLQ96DG6 245 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 C4orf36Q96KX1 117 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 CDCA4Q9BXL8 241 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 PBOV1Q9GZY1 135 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 Q9H521 79 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 ERVK-18Q9QC07 812 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 GNG8Q9UK08 70 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 LAMP3Q9UQV4 416 aa12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 LSM2Q9Y333 95 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 EXOSC1Q9Y3B2 195 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-204ENST00000553405 A0A1B0GTI1 187 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 hCG_38984A0A1B0GV85 526 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 PSMB10P40306 273 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 KLF3P57682 345 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 FAM3AP98173 230 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 OR8B8Q15620 311 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 ZNF829Q3KNS6 432 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 AGAP6Q5VW22 663 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 XAF1Q6GPH4 301 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 Q6ZR03 302 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 KRT74Q7RTS7 529 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 ELMOD2Q8IZ81 293 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 PLPP7Q8NBV4 271 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 OR5L1Q8NGL2 311 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 OR2G2Q8NGZ5 317 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 OR52N1Q8NH53 320 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 MOB1AQ9H8S9 216 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 BRD7Q9NPI1 651 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 ZNF701Q9NV72 531 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 FAIMQ9NVQ4 179 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 PURGQ9UJV8 347 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 OR52A1Q9UKL2 312 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 SLC22A13Q9Y226 551 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 PLEKHA6Q9Y2H5 1048 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 CAB39Q9Y376 341 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 SNX5Q9Y5X3 404 aa12.68□□□□□ -0.38
MTHFD1-204ENST00000553405 OR4C45A6NMZ5 311 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 IQCF6A8MYZ5 107 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 PTGES3LE9PB15 166 aa12.67□□□□□ -0.38
MTHFD1-204ENST00000553405 LOC110117498-PIK3R3F6TDL0 507 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms