RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 FAM122BQ7Z309 247 aa8.28□□□□□ -1.08
ACTN1-208ENST00000553370 LINC00346Q8IVM7 164 aa8.28□□□□□ -1.08
ACTN1-208ENST00000553370 FAM156AQ8NDB6 213 aa8.28□□□□□ -1.08
ACTN1-208ENST00000553370 C19orf18Q8NEA5 215 aa8.28□□□□□ -1.08
ACTN1-208ENST00000553370 OR52J3Q8NH60 311 aa8.28□□□□□ -1.08
ACTN1-208ENST00000553370 TAF15Q92804 592 aaKnown RBP eCLIP8.28□□□□□ -1.08
ACTN1-208ENST00000553370 RCC1LQ96I51 464 aaKnown RBP8.28□□□□□ -1.08
ACTN1-208ENST00000553370 ERMAPQ96PL5 475 aaPredicted RBP8.28□□□□□ -1.08
ACTN1-208ENST00000553370 ATF6BQ99941 703 aa8.28□□□□□ -1.08
ACTN1-208ENST00000553370 IFT27Q9BW83 186 aa8.28□□□□□ -1.08
ACTN1-208ENST00000553370 SLITRK2Q9H156 845 aa8.28□□□□□ -1.08
ACTN1-208ENST00000553370 VIPAS39Q9H9C1 493 aa8.28□□□□□ -1.08
ACTN1-208ENST00000553370 TMEM165Q9HC07 324 aa8.28□□□□□ -1.08
ACTN1-208ENST00000553370 CMTM6Q9NX76 183 aa8.28□□□□□ -1.08
ACTN1-208ENST00000553370 VSX1Q9NZR4 365 aaPredicted RBP8.28□□□□□ -1.08
ACTN1-208ENST00000553370 ERVK-18Q9QC07 812 aa8.28□□□□□ -1.08
ACTN1-208ENST00000553370 V9GYQ6 96 aa8.28□□□□□ -1.08
ACTN1-208ENST00000553370 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.27□□□□□ -1.09
ACTN1-208ENST00000553370 GGT3PA6NGU5 568 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 SRRM5B3KS81 715 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 SLC22A2O15244 555 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 MLNRO43193 412 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 TBX1O43435 398 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 ADAM20O43506 726 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 FAM20BO75063 409 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 TOX4O94842 621 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 PLATP00750 562 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 NCK1P16333 377 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 ZNF823P16415 610 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 CPEP16870 476 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 FUT4P22083 530 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 SLC6A6P31641 620 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 GSK3BP49841 420 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 NPY4RP50391 375 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 TPTEP56180 551 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 SPIBQ01892 262 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 MZT1Q08AG7 82 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 TRAP1Q12931 704 aaKnown RBP8.27□□□□□ -1.09
ACTN1-208ENST00000553370 TAF13Q15543 124 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 PRAMEF6Q5VXH4 476 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 RUSC1-AS1Q66K80 236 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 PTCHD4Q6ZW05 846 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 LNX2Q8N448 690 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 KIR3DL3Q8N743 410 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 PNLDC1Q8NA58 520 aaKnown RBP8.27□□□□□ -1.09
ACTN1-208ENST00000553370 RP9Q8TA86 221 aaKnown RBP8.27□□□□□ -1.09
ACTN1-208ENST00000553370 SLC7A13Q8TCU3 470 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 SPTSSAQ969W0 71 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 SLCO4A1Q96BD0 722 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 TSSK2Q96PF2 358 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 HOPXQ9BPY8 73 aaPredicted RBP8.27□□□□□ -1.09
ACTN1-208ENST00000553370 NOX4Q9NPH5 578 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 NRIP3Q9NQ35 241 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 TRIM36Q9NQ86 728 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 RPRD1BQ9NQG5 326 aaKnown RBP8.27□□□□□ -1.09
ACTN1-208ENST00000553370 RNF7Q9UBF6 113 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 TMCC3Q9ULS5 477 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 SAMD4AQ9UPU9 718 aaKnown RBP8.27□□□□□ -1.09
ACTN1-208ENST00000553370 N6AMT1Q9Y5N5 214 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 SOX21Q9Y651 276 aaPredicted RBP8.27□□□□□ -1.09
ACTN1-208ENST00000553370 LHFPL6Q9Y693 200 aa8.27□□□□□ -1.09
ACTN1-208ENST00000553370 KIR2DS1A0A191URI9 304 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 A0A1W2PRQ8 180 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 BTBD17A6NE02 478 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 P2RY10O00398 339 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 NME4O00746 187 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 IMPA2O14732 288 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 TIMM23O14925 209 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 SHOXO15266 292 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 COX4I1P13073 169 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 ZNF26P17031 533 aaPredicted RBP8.26□□□□□ -1.09
ACTN1-208ENST00000553370 RHCEP18577 417 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 CA6P23280 308 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 IFNGR2P38484 337 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 MDH1P40925 334 aaKnown RBP8.26□□□□□ -1.09
ACTN1-208ENST00000553370 CDKN2AP42771 156 aaKnown RBP8.26□□□□□ -1.09
ACTN1-208ENST00000553370 SMIM11AP58511 58 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 BPIFB3P59826 476 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 FHL1Q13642 323 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 DGCR6Q14129 220 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 GK2Q14410 553 aaPredicted RBP8.26□□□□□ -1.09
ACTN1-208ENST00000553370 PDCD1Q15116 288 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 ZNF181Q2M3W8 571 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 WDR25Q64LD2 544 aaPredicted RBP8.26□□□□□ -1.09
ACTN1-208ENST00000553370 OLFML2AQ68BL7 652 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 SFRP4Q6FHJ7 346 aaPredicted RBP8.26□□□□□ -1.09
ACTN1-208ENST00000553370 LYPD2Q6UXB3 125 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 SLC15A3Q8IY34 581 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 FITM2Q8N6M3 262 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 OR52L1Q8NGH7 329 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 OR4C15Q8NGM1 316 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 OR4K13Q8NH42 304 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 TBC1D15Q8TC07 691 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 SSMEM1Q8WWF3 244 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 ERGIC1Q969X5 290 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 MCUR1Q96AQ8 359 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 FAM71F1Q96KD3 344 aaPredicted RBP8.26□□□□□ -1.09
ACTN1-208ENST00000553370 GPX7Q96SL4 187 aaPredicted RBP8.26□□□□□ -1.09
ACTN1-208ENST00000553370 TRIM15Q9C019 465 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 SLC22A4Q9H015 551 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms