RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 NARFLQ9H6Q4 476 aa12.98□□□□□ -0.33
SHMT2-204ENST00000553324 NIPAL2Q9H841 368 aa12.98□□□□□ -0.33
SHMT2-204ENST00000553324 TREM2Q9NZC2 230 aa12.98□□□□□ -0.33
SHMT2-204ENST00000553324 NPTNQ9Y639 398 aa12.98□□□□□ -0.33
SHMT2-204ENST00000553324 CACNG2Q9Y698 323 aa12.98□□□□□ -0.33
SHMT2-204ENST00000553324 TMEM14AQ9Y6G1 99 aa12.98□□□□□ -0.33
SHMT2-204ENST00000553324 ZAR1LA6NP61 321 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 CD300LBA8K4G0 201 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 GMDSO60547 372 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 FAM157CP0CG43 387 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 PSKH1P11801 424 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 SLC2A5P22732 501 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 IGFBP5P24593 272 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 OPRL1P41146 370 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 CX3CR1P49238 355 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 ZNF92Q03936 586 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 MZT1Q08AG7 82 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 APOFQ13790 326 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 SNAI3Q3KNW1 292 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 AVPI1Q5T686 147 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 SLX4IPQ5VYV7 408 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 DEGS2Q6QHC5 323 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 SLC16A9Q7RTY1 509 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 KLBQ86Z14 1044 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 SPERTQ8NA61 448 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 BHLHE23Q8NDY6 225 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 OR51F2Q8NH61 342 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 ITLN1Q8WWA0 313 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 PYDC1Q8WXC3 89 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 MEGF10Q96KG7 1140 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 RAB3IPQ96QF0 476 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-204ENST00000553324 GAL3ST1Q99999 423 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 SOX7Q9BT81 388 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 SEMA6AQ9H2E6 1030 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 ZNF665Q9H7R5 613 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 GCM1Q9NP62 436 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 MRPL15Q9P015 296 aaKnown RBP12.97□□□□□ -0.33
SHMT2-204ENST00000553324 LAMP5Q9UJQ1 280 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 OAZ3Q9UMX2 235 aa12.97□□□□□ -0.33
SHMT2-204ENST00000553324 LRRC30A6NM36 301 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 WNT9BO14905 357 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 MITFO75030 526 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-204ENST00000553324 ANXA2P07355 339 aaKnown RBP12.96□□□□□ -0.33
SHMT2-204ENST00000553324 MSMBP08118 114 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 CPT2P23786 658 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 EFNB1P98172 346 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 KPNB1Q14974 876 aaKnown RBP12.96□□□□□ -0.33
SHMT2-204ENST00000553324 SNCBQ16143 134 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 TIGD6Q17RP2 521 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 ZNF181Q2M3W8 571 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 GLYATL3Q5SZD4 288 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 FAM120AOSQ5T036 256 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 KCTD18Q6PI47 426 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-204ENST00000553324 SPATC1Q76KD6 591 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 GLCCI1Q86VQ1 547 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 C1orf87Q8N0U7 546 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 SPICQ8N5J4 248 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 PLPP7Q8NBV4 271 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 SPSB4Q96A44 273 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 OR10A2Q9H208 303 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 RGCCQ9H4X1 137 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 TMEFF2Q9UIK5 374 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-204ENST00000553324 N6AMT1Q9Y5N5 214 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 NAV3Q8IVL0 2385 aa12.96□□□□□ -0.33
SHMT2-204ENST00000553324 CHD3Q12873 2000 aaKnown RBP12.96□□□□□ -0.34
SHMT2-204ENST00000553324 TRAV20A0A0B4J274 112 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 ISPDA4D126 451 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 SLC22A31A6NKX4 558 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 MLNRO43193 412 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 TBX1O43435 398 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 PRKYO43930 277 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 SELENOFO60613 162 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 SBK2P0C263 348 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 SLC2A1P11166 492 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 IRF2P14316 349 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 ALOX5APP20292 161 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 GATA4P43694 442 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 OR8G1Q15617 311 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 CR1LQ2VPA4 569 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 TMEM155Q4W5P6 130 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 SPRNQ5BIV9 151 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 NXNL2Q5VZ03 156 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 C12orf73Q69YU5 71 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 MEPCEQ7L2J0 689 aaKnown RBP12.95□□□□□ -0.34
SHMT2-204ENST00000553324 LRRC28Q86X40 367 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-204ENST00000553324 FTMTQ8N4E7 242 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 KLHL36Q8N4N3 616 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 TEX29Q8N6K0 151 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 TCEANCQ8N8B7 351 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 BBS1Q8NFJ9 593 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 OR10AD1Q8NGE0 317 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 TMEM163Q8TC26 289 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 ASB17Q8WXJ9 295 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 ITFG2Q969R8 447 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 TMEM186Q96B77 213 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 MNTQ99583 582 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 CIB1Q99828 191 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 MROQ9BYG7 248 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 ZNF391Q9UJN7 358 aa12.95□□□□□ -0.34
SHMT2-204ENST00000553324 PCDHB10Q9UN67 800 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms