RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 OR4D1Q15615 310 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 POU2AF1Q16633 256 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 TCTEX1D4Q5JR98 221 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 ACTL10Q5JWF8 245 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 CAMK2N1Q7Z7J9 78 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 GTSCR1Q86UQ5 136 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 P2RY8Q86VZ1 359 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 SLC30A8Q8IWU4 369 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 DOK4Q8TEW6 326 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 RGP1Q92546 391 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-208ENST00000553278 LRRC58Q96CX6 371 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 UBE2E2Q96LR5 201 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 SLC25A2Q9BXI2 301 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 PORCNQ9H237 461 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 LINC00597Q9H2U6 94 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 PLEKHA1Q9HB21 404 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 MYOZ1Q9NP98 299 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-208ENST00000553278 FBXO8Q9NRD0 319 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 EURLQ9NYK6 297 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 UBAP1Q9NZ09 502 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 TRAPPC4Q9Y296 219 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 ACOT9Q9Y305 439 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 URGCP-MRPS24S4R325 110 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 V9GYY5 206 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-208ENST00000553278 IGHV3OR16-9A0A0B4J2B5 98 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 ENSAO43768 121 aaKnown RBP4.15□□□□□ -1.75
SCFD1-208ENST00000553278 TTC4O95801 387 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 PTHP01270 115 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 OR5AL1P0C617 328 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 PNMA6AP0CW24 399 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-208ENST00000553278 HCAR3P49019 387 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 RGS6P49758 472 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 NUP107P57740 925 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 MLF1P58340 268 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 KDSRQ06136 332 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 KIR2DS1Q14954 304 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 C5orf47Q569G3 176 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 C9orf129Q5T035 196 aaKnown RBP4.15□□□□□ -1.75
SCFD1-208ENST00000553278 FAM27D1Q5T7N8 215 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 ACP7Q6ZNF0 438 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 BHLHA15Q7RTS1 189 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-208ENST00000553278 STPG2Q8N412 459 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 FAM71E2Q8N5Q1 922 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 OR11H7Q8NGC8 314 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 OR6X1Q8NH79 312 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 IFT81Q8WYA0 676 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 ZNF75AQ96N20 296 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 CTRCQ99895 268 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 GABRG3Q99928 467 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 BEX2Q9BXY8 128 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 SLIRPQ9GZT3 109 aaKnown RBP4.15□□□□□ -1.75
SCFD1-208ENST00000553278 EDA2RQ9HAV5 297 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 RHBDL2Q9NX52 303 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 MAT2BQ9NZL9 334 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 DEC1Q9P2X7 70 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 USP42Q9H9J4 1324 aaKnown RBP4.15□□□□□ -1.75
SCFD1-208ENST00000553278 WDR62O43379 1518 aa4.15□□□□□ -1.75
SCFD1-208ENST00000553278 A0A1B0GTI1 187 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 GOLGA8RI6L899 631 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 PLPP3O14495 311 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 B4GALT5O43286 388 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 CTNSO60931 367 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 NIPSNAP2O75323 286 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 UPK1BO75841 260 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 CD3GP09693 182 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 GIMD1P0DJR0 217 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 THRAP10827 490 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 LIPCP11150 499 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 GATA2P23769 480 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-208ENST00000553278 PSMB6P28072 239 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 LOXP28300 417 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-208ENST00000553278 MYCNOSP40205 109 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 CAV2P51636 162 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 UBE2NP61088 152 aaKnown RBP4.14□□□□□ -1.75
SCFD1-208ENST00000553278 LYZP61626 148 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 SLAMF1Q13291 335 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 RESP18Q5W5W9 173 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 COX15Q7KZN9 410 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 TGIF2LYQ8IUE0 185 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 UBAC2Q8NBM4 344 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 DCPSQ96C86 337 aaKnown RBP4.14□□□□□ -1.75
SCFD1-208ENST00000553278 HAUS1Q96CS2 278 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 ANGPTL4Q9BY76 406 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 TMBIM4Q9HC24 238 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 CD84Q9UIB8 345 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 UBIAD1Q9Y5Z9 338 aa4.14□□□□□ -1.75
SCFD1-208ENST00000553278 IGHV2OR16-5A0A0B4J2B6 119 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 C1orf232A0A0U1RR37 186 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 MKRN2OSH3BPM6 223 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 ZNF593O00488 134 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-208ENST00000553278 RAD51BO15315 384 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 EMC8O43402 210 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 SUPT3HO75486 399 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 FUT3P21217 361 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 CD40LGP29965 261 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 STX17P56962 302 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 SLC35A1P78382 337 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 HMGCS1Q01581 520 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 HERPUD1Q15011 391 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 METTL21CQ5VZV1 264 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms