RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ALOX5APP20292 161 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 PAICSP22234 425 aaKnown RBP16.24■□□□□ 0.19
PTCH1-227ENST00000553256 GATA4P43694 442 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 MMP16P51512 607 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 EIF2B1Q14232 305 aaKnown RBP16.24■□□□□ 0.19
PTCH1-227ENST00000553256 CR1LQ2VPA4 569 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 KLHL12Q53G59 568 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 AADACL4Q5VUY2 407 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 SHFQ7M4L6 423 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 CENPNQ96H22 339 aaPredicted RBP16.24■□□□□ 0.19
PTCH1-227ENST00000553256 G6PC2Q9NQR9 355 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 CENPMQ9NSP4 180 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 TVP23BQ9NYZ1 205 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 LPAR3Q9UBY5 353 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 NPTNQ9Y639 398 aa16.24■□□□□ 0.19
PTCH1-227ENST00000553256 CD300LBA8K4G0 201 aa16.23■□□□□ 0.19
PTCH1-227ENST00000553256 FCGR1AP12314 374 aa16.23■□□□□ 0.19
PTCH1-227ENST00000553256 TNFRSF1AP19438 455 aa16.23■□□□□ 0.19
PTCH1-227ENST00000553256 POLR2IP36954 125 aaKnown RBP16.23■□□□□ 0.19
PTCH1-227ENST00000553256 GRB2P62993 217 aaKnown RBP16.23■□□□□ 0.19
PTCH1-227ENST00000553256 SLC3A1Q07837 685 aa16.23■□□□□ 0.19
PTCH1-227ENST00000553256 ZNF181Q2M3W8 571 aa16.23■□□□□ 0.19
PTCH1-227ENST00000553256 PGAP1Q75T13 922 aa16.23■□□□□ 0.19
PTCH1-227ENST00000553256 CXXC5Q7LFL8 322 aaKnown RBP16.23■□□□□ 0.19
PTCH1-227ENST00000553256 ZDHHC13Q8IUH4 622 aa16.23■□□□□ 0.19
PTCH1-227ENST00000553256 ZNF454Q8N9F8 522 aa16.23■□□□□ 0.19
PTCH1-227ENST00000553256 BHLHE23Q8NDY6 225 aa16.23■□□□□ 0.19
PTCH1-227ENST00000553256 RAB1CQ92928 201 aa16.23■□□□□ 0.19
PTCH1-227ENST00000553256 SGK3Q96BR1 496 aa16.23■□□□□ 0.19
PTCH1-227ENST00000553256 TEAD3Q99594 435 aa16.23■□□□□ 0.19
PTCH1-227ENST00000553256 TOR3AQ9H497 397 aa16.23■□□□□ 0.19
PTCH1-227ENST00000553256 F5H5P2 479 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 TMEM178BH3BS89 294 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 M0R129 80 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 FSTL3O95633 263 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 HLA-DPB1P04440 258 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 MSMBP08118 114 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 TNFSF4P23510 183 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 THBS2P35442 1172 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 CD200P41217 278 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 MALLQ13021 153 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 ZMYND11Q15326 602 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 SNAPC1Q16533 368 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 IL17RELQ6ZVW7 336 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 SPATC1Q76KD6 591 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 BCDIN3DQ7Z5W3 292 aaKnown RBP16.22■□□□□ 0.19
PTCH1-227ENST00000553256 LRRC28Q86X40 367 aaPredicted RBP16.22■□□□□ 0.19
PTCH1-227ENST00000553256 CELF2-AS1Q8N7Q2 184 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 PYDC1Q8WXC3 89 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 TMEM186Q96B77 213 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 MDFIQ99750 246 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 CIB1Q99828 191 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 OSBPL10Q9BXB5 764 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 GABARAPL3Q9BY60 117 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 SEMA6AQ9H2E6 1030 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 KRT84Q9NSB2 600 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 TMEM100Q9NV29 134 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 OAZ3Q9UMX2 235 aa16.22■□□□□ 0.19
PTCH1-227ENST00000553256 F5H0A9 414 aaPredicted RBP16.21■□□□□ 0.19
PTCH1-227ENST00000553256 SLC15A1P46059 708 aa16.21■□□□□ 0.19
PTCH1-227ENST00000553256 SLC6A9P48067 706 aa16.21■□□□□ 0.19
PTCH1-227ENST00000553256 CX3CR1P49238 355 aa16.21■□□□□ 0.19
PTCH1-227ENST00000553256 FAM3AP98173 230 aa16.21■□□□□ 0.19
PTCH1-227ENST00000553256 APOFQ13790 326 aa16.21■□□□□ 0.19
PTCH1-227ENST00000553256 KPNB1Q14974 876 aaKnown RBP16.21■□□□□ 0.19
PTCH1-227ENST00000553256 TMEM155Q4W5P6 130 aa16.21■□□□□ 0.19
PTCH1-227ENST00000553256 C1orf229Q6ZS94 237 aaPredicted RBP16.21■□□□□ 0.19
PTCH1-227ENST00000553256 Q8TCH9 128 aa16.21■□□□□ 0.19
PTCH1-227ENST00000553256 OTULINQ96BN8 352 aa16.21■□□□□ 0.19
PTCH1-227ENST00000553256 PKP2Q99959 881 aa16.21■□□□□ 0.19
PTCH1-227ENST00000553256 BEX2Q9BXY8 128 aa16.21■□□□□ 0.19
PTCH1-227ENST00000553256 MRPL15Q9P015 296 aaKnown RBP16.21■□□□□ 0.19
PTCH1-227ENST00000553256 KIF17Q9P2E2 1029 aa16.21■□□□□ 0.19
PTCH1-227ENST00000553256 PPP1R3CQ9UQK1 317 aa16.21■□□□□ 0.19
PTCH1-227ENST00000553256 hCG_38984A0A1B0GV85 526 aa16.2■□□□□ 0.18
PTCH1-227ENST00000553256 PLPP2O43688 288 aa16.2■□□□□ 0.18
PTCH1-227ENST00000553256 AVPP01185 164 aa16.2■□□□□ 0.18
PTCH1-227ENST00000553256 LYNP07948 512 aa16.2■□□□□ 0.18
PTCH1-227ENST00000553256 NAA10P41227 235 aaPredicted RBP16.2■□□□□ 0.18
PTCH1-227ENST00000553256 HCCSP53701 268 aa16.2■□□□□ 0.18
PTCH1-227ENST00000553256 ZNF121P58317 390 aaPredicted RBP16.2■□□□□ 0.18
PTCH1-227ENST00000553256 CCDC121Q6ZUS5 278 aa16.2■□□□□ 0.18
PTCH1-227ENST00000553256 KRT74Q7RTS7 529 aa16.2■□□□□ 0.18
PTCH1-227ENST00000553256 SLC16A9Q7RTY1 509 aa16.2■□□□□ 0.18
PTCH1-227ENST00000553256 MRPL21Q7Z2W9 205 aaKnown RBP16.2■□□□□ 0.18
PTCH1-227ENST00000553256 ZNF420Q8TAQ5 688 aaPredicted RBP16.2■□□□□ 0.18
PTCH1-227ENST00000553256 TIMD4Q96H15 378 aa16.2■□□□□ 0.18
PTCH1-227ENST00000553256 YIPF3Q9GZM5 350 aa16.2■□□□□ 0.18
PTCH1-227ENST00000553256 SHARPINQ9H0F6 387 aa16.2■□□□□ 0.18
PTCH1-227ENST00000553256 OPA3Q9H6K4 179 aa16.2■□□□□ 0.18
PTCH1-227ENST00000553256 HIF1ANQ9NWT6 349 aa16.2■□□□□ 0.18
PTCH1-227ENST00000553256 COPS3Q9UNS2 423 aa16.2■□□□□ 0.18
PTCH1-227ENST00000553256 POLR3KQ9Y2Y1 108 aaPredicted RBP16.2■□□□□ 0.18
PTCH1-227ENST00000553256 XRCC2O43543 280 aa16.19■□□□□ 0.18
PTCH1-227ENST00000553256 CIB2O75838 187 aa16.19■□□□□ 0.18
PTCH1-227ENST00000553256 ZFP36P26651 326 aaKnown RBP16.19■□□□□ 0.18
PTCH1-227ENST00000553256 BTG1P62324 171 aa16.19■□□□□ 0.18
PTCH1-227ENST00000553256 ROM1Q03395 351 aa16.19■□□□□ 0.18
PTCH1-227ENST00000553256 OR56B2PQ8NGI1 322 aa16.19■□□□□ 0.18
PTCH1-227ENST00000553256 OR51F2Q8NH61 342 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms