RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 PIEZO2Q9H5I5 2752 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 CALCBP10092 127 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 ANKRD16Q6P6B7 361 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 LYPD6Q86Y78 171 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 OR52H1Q8NGJ2 320 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 OR1K1Q8NGR3 316 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 OR14K1Q8NGZ2 314 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 CHPT1Q8WUD6 406 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 STEAP1Q9UHE8 339 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 ATPIF1Q9UII2 106 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 ISPDA4D126 451 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 MEGF11A6BM72 1044 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 SVILO95425 2214 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 ABOP16442 354 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 CXADRP78310 365 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 SPOCK1Q08629 439 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 IL18Q14116 193 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 RTL6Q6ICC9 239 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 OR2A2Q6IF42 318 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 BCL2L2Q92843 193 aaPredicted RBP17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 SLC25A38Q96DW6 304 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 RNF121Q9H920 327 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 NCOR2Q9Y618 2525 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 MBD3L4A6NDZ8 208 aaPredicted RBP17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 MBD3L3A6NE82 208 aaPredicted RBP17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 MBD3L5A6NJ08 208 aaPredicted RBP17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 SLC17A2O00624 439 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 FAM87AP0C7U9 286 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 ID4P47928 161 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 FOXF2Q12947 444 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 OR5D14Q8NGL3 314 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 MBD3L2Q8NHZ7 208 aaPredicted RBP17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 SGK3Q96BR1 496 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 NKX3-1Q99801 234 aaPredicted RBP17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 OR10A2Q9H208 303 aa17.04■□□□□ 0.32
RBFOX1-215ENST00000553186 ARHGAP21Q5T5U3 1957 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 A0A0G2JMP0 313 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 A0A0X1KG70 313 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 TALDO1P37837 337 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 GNALP38405 381 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 HIKESHIQ53FT3 197 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 PYDC2Q56P42 97 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 UBE2NLQ5JXB2 153 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 GLT8D1Q68CQ7 371 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 VWA1Q6PCB0 445 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 DCDC5Q6ZRR9 648 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 OR8H2Q8N162 312 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 CNEP1R1Q8N9A8 125 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 DTX3Q8N9I9 347 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 OR4M2Q8NGB6 313 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 OR6K3Q8NGY3 331 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 B3GNT2Q9NY97 397 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 V9GYS6 101 aa17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 MAP1BP46821 2468 aaKnown RBP17.03■□□□□ 0.32
RBFOX1-215ENST00000553186 LOC100509620A0A075B734 347 aa17.02■□□□□ 0.32
RBFOX1-215ENST00000553186 LOC390937A0A1W2PQ73 354 aa17.02■□□□□ 0.32
RBFOX1-215ENST00000553186 CSF3P09919 207 aa17.02■□□□□ 0.32
RBFOX1-215ENST00000553186 IL7P13232 177 aa17.02■□□□□ 0.32
RBFOX1-215ENST00000553186 IGHV1-2P23083 117 aa17.02■□□□□ 0.32
RBFOX1-215ENST00000553186 SCAND1P57086 179 aa17.02■□□□□ 0.32
RBFOX1-215ENST00000553186 OXA1LQ15070 435 aa17.02■□□□□ 0.32
RBFOX1-215ENST00000553186 LINC00303Q3SY05 128 aa17.02■□□□□ 0.32
RBFOX1-215ENST00000553186 CENPSQ8N2Z9 138 aa17.02■□□□□ 0.32
RBFOX1-215ENST00000553186 OR1M1Q8NGA1 313 aa17.02■□□□□ 0.32
RBFOX1-215ENST00000553186 SLC25A28Q96A46 364 aa17.02■□□□□ 0.32
RBFOX1-215ENST00000553186 RHBDD3Q9Y3P4 386 aa17.02■□□□□ 0.32
RBFOX1-215ENST00000553186 FAM215AQ9Y5M1 114 aa17.02■□□□□ 0.32
RBFOX1-215ENST00000553186 TNFSF13O75888 250 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 DHRS3O75911 302 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 TOXO94900 526 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 CNOT4O95628 575 aaKnown RBP17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 COX5BP10606 129 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 CD79AP11912 226 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 GABRA1P14867 456 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 ZNF20P17024 532 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 ARR3P36575 388 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 TDGF1P3P51864 188 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 RAB1AP62820 205 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 Q6ZNX1 250 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 Q6ZT83 130 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 CMTM4Q8IZR5 234 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 NKAIN3Q8N8D7 197 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 TMEM138Q9NPI0 162 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 CGGBP1Q9UFW8 167 aaPredicted RBP17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 ETV7Q9Y603 341 aa17.02■□□□□ 0.31
RBFOX1-215ENST00000553186 WDR1O75083 606 aa17.01■□□□□ 0.31
RBFOX1-215ENST00000553186 LCATP04180 440 aa17.01■□□□□ 0.31
RBFOX1-215ENST00000553186 TPOP07202 933 aa17.01■□□□□ 0.31
RBFOX1-215ENST00000553186 BDKRB2P30411 391 aa17.01■□□□□ 0.31
RBFOX1-215ENST00000553186 PITPNBP48739 271 aa17.01■□□□□ 0.31
RBFOX1-215ENST00000553186 SF3B4Q15427 424 aaKnown RBP eCLIP17.01■□□□□ 0.31
RBFOX1-215ENST00000553186 GLYATL3Q5SZD4 288 aa17.01■□□□□ 0.31
RBFOX1-215ENST00000553186 CISD2Q8N5K1 135 aaKnown RBP17.01■□□□□ 0.31
RBFOX1-215ENST00000553186 OR13C9Q8NGT0 318 aa17.01■□□□□ 0.31
RBFOX1-215ENST00000553186 ABCG5Q9H222 651 aa17.01■□□□□ 0.31
RBFOX1-215ENST00000553186 ZZEF1O43149 2961 aa17.01■□□□□ 0.31
RBFOX1-215ENST00000553186 DOCK7Q96N67 2140 aa17.01■□□□□ 0.31
RBFOX1-215ENST00000553186 C1QTNF9BB2RNN3 333 aa17.01■□□□□ 0.31
RBFOX1-215ENST00000553186 C1QTNF9P0C862 333 aa17.01■□□□□ 0.31
RBFOX1-215ENST00000553186 RAB3AP20336 220 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms