RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 NDEL1Q9GZM8 345 aa13.89□□□□□ -0.19
CACNB3-222ENST00000552465 NRIP3Q9NQ35 241 aa13.89□□□□□ -0.19
CACNB3-222ENST00000552465 NOP16Q9Y3C1 178 aaKnown RBP13.89□□□□□ -0.19
CACNB3-222ENST00000552465 SOCS2O14508 198 aa13.88□□□□□ -0.19
CACNB3-222ENST00000552465 GMDSO60547 372 aa13.88□□□□□ -0.19
CACNB3-222ENST00000552465 NDUFB2O95178 105 aa13.88□□□□□ -0.19
CACNB3-222ENST00000552465 LCATP04180 440 aa13.88□□□□□ -0.19
CACNB3-222ENST00000552465 CDKN2AP42771 156 aaKnown RBP13.88□□□□□ -0.19
CACNB3-222ENST00000552465 LOXL3P58215 753 aa13.88□□□□□ -0.19
CACNB3-222ENST00000552465 POU4F2Q12837 409 aa13.88□□□□□ -0.19
CACNB3-222ENST00000552465 METAP1DQ6UB28 335 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-222ENST00000552465 ADCK1Q86TW2 530 aa13.88□□□□□ -0.19
CACNB3-222ENST00000552465 FAM90A1Q86YD7 464 aa13.88□□□□□ -0.19
CACNB3-222ENST00000552465 LZICQ8WZA0 190 aa13.88□□□□□ -0.19
CACNB3-222ENST00000552465 ST8SIA4Q92187 359 aa13.88□□□□□ -0.19
CACNB3-222ENST00000552465 PPP1R14AQ96A00 147 aa13.88□□□□□ -0.19
CACNB3-222ENST00000552465 TSSK2Q96PF2 358 aa13.88□□□□□ -0.19
CACNB3-222ENST00000552465 C1orf123Q9NWV4 160 aa13.88□□□□□ -0.19
CACNB3-222ENST00000552465 KAAG1Q9UBP8 84 aa13.88□□□□□ -0.19
CACNB3-222ENST00000552465 ANKRD61A6NGH8 418 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 CD300LBA8K4G0 201 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 DCTN6O00399 190 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 PPP1R3DO95685 299 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 LHBP01229 141 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 IFNW1P05000 195 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 GABRA5P31644 462 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 ECH1Q13011 328 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 CFAP77Q6ZQR2 320 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 ZNF826PQ6ZT77 177 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 MRPL21Q7Z2W9 205 aaKnown RBP13.87□□□□□ -0.19
CACNB3-222ENST00000552465 VTCN1Q7Z7D3 282 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 GCSAMQ8N6F7 178 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 LY6G5BQ8NDX9 201 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 GPX7Q96SL4 187 aaPredicted RBP13.87□□□□□ -0.19
CACNB3-222ENST00000552465 PITX2Q99697 317 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 PPA2Q9H2U2 334 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 SIGLEC7Q9Y286 467 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 SIGLEC9Q9Y336 463 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 IER3IP1Q9Y5U9 82 aa13.87□□□□□ -0.19
CACNB3-222ENST00000552465 FAM220BPB1ANY3 271 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 RNASEK-C17orf49H0YIS7 233 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 EEF1B2P24534 225 aaKnown RBP13.86□□□□□ -0.19
CACNB3-222ENST00000552465 CRABP1P29762 137 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 MDH1P40925 334 aaKnown RBP13.86□□□□□ -0.19
CACNB3-222ENST00000552465 GUCA2AQ02747 115 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 TRAP1Q12931 704 aaKnown RBP13.86□□□□□ -0.19
CACNB3-222ENST00000552465 TEX36Q5VZQ5 186 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 SLC18B1Q6NT16 456 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 RRM2BQ7LG56 351 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 LINC00346Q8IVM7 164 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 FGFRL1Q8N441 504 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 OR5R1Q8NH85 324 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 CFHR4Q92496 578 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 DMRTB1Q96MA1 342 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 ATF6BQ99941 703 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 ADAT1Q9BUB4 502 aaKnown RBP13.86□□□□□ -0.19
CACNB3-222ENST00000552465 SIRT7Q9NRC8 400 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 ONECUT1Q9UBC0 465 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 B9D1Q9UPM9 204 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 AURKCQ9UQB9 309 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 TMEM5Q9Y2B1 443 aa13.86□□□□□ -0.19
CACNB3-222ENST00000552465 TET2Q6N021 2002 aaPredicted RBP13.86□□□□□ -0.19
CACNB3-222ENST00000552465 IGHV3OR15-7A0A075B7D8 119 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 IGLV1-36A0A0B4J1U3 117 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 NPFFO15130 113 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 TXNDC12O95881 172 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 NPPAP01160 153 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 GRPP07492 148 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 PRB3Q04118 309 aaPredicted RBP13.85□□□□□ -0.19
CACNB3-222ENST00000552465 AGBL2Q5U5Z8 902 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 DNM1P34Q6PK57 102 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 DPY19L2P2Q6ZN68 376 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 TSEN54Q7Z6J9 526 aaKnown RBP13.85□□□□□ -0.19
CACNB3-222ENST00000552465 CMTM4Q8IZR5 234 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 C11orf44Q8N8P7 122 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 SPERTQ8NA61 448 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 SLC26A10Q8NG04 563 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 OR2T12Q8NG77 320 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 FAM46AQ96IP4 442 aaKnown RBP13.85□□□□□ -0.19
CACNB3-222ENST00000552465 SRA1Q9HD15 236 aaKnown RBP13.85□□□□□ -0.19
CACNB3-222ENST00000552465 PNRC2Q9NPJ4 139 aaKnown RBP13.85□□□□□ -0.19
CACNB3-222ENST00000552465 FOXJ3Q9UPW0 622 aa13.85□□□□□ -0.19
CACNB3-222ENST00000552465 NBEAL2Q6ZNJ1 2754 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 A0A1B0GW55 424 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 A0A1W2PRD5 423 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 A0A1W2PRF3 423 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 A0A1W2PRM7 423 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 GGT3PA6NGU5 568 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 A6NLC8 198 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 PAHP00439 452 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 DUX4L2P0CJ85 424 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 DUX4L3P0CJ86 424 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 DUX4L4P0CJ87 422 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 DUX4L5P0CJ88 424 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 DUX4L6P0CJ89 424 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 DUX4L7P0CJ90 424 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 GGT2P36268 569 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 KIR2DS4P43632 304 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 EFNB2P52799 333 aa13.84□□□□□ -0.19
CACNB3-222ENST00000552465 TPTEP56180 551 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms