RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 ZNF222Q9UK12 451 aa12.34□□□□□ -0.43
RAB3IP-216ENST00000552199 KMT2EQ8IZD2 1858 aa12.34□□□□□ -0.43
RAB3IP-216ENST00000552199 METTL21EPA6NDL7 271 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 MEIS3P1A6NDR6 274 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 E9PLN8 166 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 LPLP06858 475 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 AKAIN1P0CW23 69 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 SULT1A3P0DMM9 295 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 SULT1A4P0DMN0 295 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 GTF2F2P13984 249 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 CXCL3P19876 107 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 QRFPP83859 136 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 RSPO1Q2MKA7 263 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 MOGAT2Q3SYC2 334 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 Q5BKY6 102 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 METTL11BQ5VVY1 283 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 NAA40Q86UY6 237 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 OR5AS1Q8N127 324 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 PIAS4Q8N2W9 510 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 PAQR4Q8N4S7 273 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 ABI3Q9P2A4 366 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 C5orf63A6NC05 138 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 LINC01387J3KSC0 135 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 FABP7O15540 132 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 GALR2O43603 387 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 SSNA1O43805 119 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 IGLV3-1P01715 115 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 ANXA3P12429 323 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 ITGA3P26006 1051 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 OTX1P32242 354 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 ZNF93P35789 620 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 RAD52P43351 418 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 MECP2P51608 486 aaKnown RBP12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 ACTBP60709 375 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 ACTG1P63261 375 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 SPEM2Q0P670 501 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 BCL2A1Q16548 175 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 RAB12Q6IQ22 244 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 ZNF782Q6ZMW2 699 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 AAED1Q7RTV5 226 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 CDH26Q8IXH8 852 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 ASCC1Q8N9N2 400 aaKnown RBP12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 CLEC1AQ8NC01 280 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 OR14K1Q8NGZ2 314 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 ITFG2Q969R8 447 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 FBXO17Q96EF6 278 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 MED30Q96HR3 178 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 B3GNT4Q9C0J1 378 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 FBLN5Q9UBX5 448 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 IL17BQ9UHF5 180 aa12.33□□□□□ -0.44
RAB3IP-216ENST00000552199 CNTRLQ7Z7A1 2325 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 MEIKINA0A087WXM9 373 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 A0A0U1RQV5 110 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 F5H5K5 113 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 STMND1H3BQB6 276 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 IL5P05113 134 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 VSIG8P0DPA2 414 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 AIMP2Q13155 320 aaKnown RBP12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 UNC119Q13432 240 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 GFOD2Q3B7J2 385 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 PDSS1Q5T2R2 415 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 GLDNQ6ZMI3 551 aaPredicted RBP12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 Q6ZTK2 550 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 ANGPTL5Q86XS5 388 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 TMEM229BQ8NBD8 167 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 OR4D10Q8NGI6 311 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 CPT1CQ8TCG5 803 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 FAM46BQ96A09 425 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 LYZL4Q96KX0 146 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 HYLS1Q96M11 299 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 IP6K3Q96PC2 410 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 SLCO5A1Q9H2Y9 848 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 SLA2Q9H6Q3 261 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 ING4Q9UNL4 249 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 AHCTF1Q8WYP5 2266 aa12.32□□□□□ -0.44
RAB3IP-216ENST00000552199 CYTIPO60759 359 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 APOC1P02654 83 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 CD3DP04234 171 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 GSTT2P0CG29 244 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 RBMS2Q15434 407 aaKnown RBP12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 OR1C1Q15619 314 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 TRIP6Q15654 476 aaKnown RBP12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 STEAP1BQ6NZ63 245 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 RNF144BQ7Z419 303 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 SULF2Q8IWU5 870 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 GABRG1Q8N1C3 465 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 ACBD4Q8NC06 268 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 NKD1Q969G9 470 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 CPNE4Q96A23 557 aaPredicted RBP12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 HES7Q9BYE0 225 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 ZNF703Q9H7S9 590 aaPredicted RBP12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 CRLF2Q9HC73 371 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 PLEK2Q9NYT0 353 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 KNTC1P50748 2209 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 TMEM14DPA8MWL7 114 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 RAB27BO00194 218 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 TNFRSF10AO00220 468 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 HPNP05981 417 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 CST2P09228 141 aa12.31□□□□□ -0.44
RAB3IP-216ENST00000552199 ANXA7P20073 488 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms