RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 TTC29Q8NA56 475 aaPredicted RBP3.02□□□□□ -1.93
LIMA1-208ENST00000551691 LINC01555Q8NAE3 123 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 LINC00301Q8NCQ3 95 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 OR52K1Q8NGK4 314 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 ST8SIA1Q92185 356 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 TFGQ92734 400 aaPredicted RBP3.02□□□□□ -1.93
LIMA1-208ENST00000551691 PEX13Q92968 403 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 TSLPQ969D9 159 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 SLC38A4Q969I6 547 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 NTAN1Q96AB6 310 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 NABP1Q96AH0 204 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF285Q96NJ3 590 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 IL4I1Q96RQ9 567 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 LYSMD1Q96S90 227 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 CHCHD5Q9BSY4 110 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 CNPY3Q9BT09 278 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 MED18Q9BUE0 208 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 OR52A5Q9H2C5 316 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 FAM96AQ9H5X1 160 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 DHX35Q9H5Z1 703 aaKnown RBP3.02□□□□□ -1.93
LIMA1-208ENST00000551691 TMEM185BQ9H7F4 350 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 NMRAL1Q9HBL8 299 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 NUDT15Q9NV35 164 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 NUDT4Q9NZJ9 180 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 MDFICQ9P1T7 246 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 CACNG5Q9UF02 275 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF639Q9UID6 485 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 GAB2Q9UQC2 676 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 RASD1Q9Y272 281 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 POLDIP2Q9Y2S7 368 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 PYGO1Q9Y3Y4 419 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 UBR4Q5T4S7 5183 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 FRAS1Q86XX4 4008 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 SAGE2PA6NJ88 616 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 FOXI3A8MTJ6 420 aaPredicted RBP3.01□□□□□ -1.93
LIMA1-208ENST00000551691 H0YGG7 62 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 KIF2AO00139 706 aaPredicted RBP3.01□□□□□ -1.93
LIMA1-208ENST00000551691 CDC7O00311 574 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 DYNC1I1O14576 645 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 PIN1P1O15428 100 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 IDH3BO43837 385 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 OR10H3O60404 316 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF354AO60765 605 aaPredicted RBP3.01□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF432O94892 652 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 H6PDO95479 791 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 SERPIND1P05546 499 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 GZMAP12544 262 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 ATP1B2P14415 290 aaPredicted RBP3.01□□□□□ -1.93
LIMA1-208ENST00000551691 GABRA1P14867 456 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 PTBP1P26599 531 aaKnown RBP eCLIP3.01□□□□□ -1.93
LIMA1-208ENST00000551691 PSMB5P28074 263 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 RRM2P31350 389 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 OPRM1P35372 400 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 ELK3P41970 407 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 RFX3P48380 749 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 DAP3P51398 398 aaKnown RBP3.01□□□□□ -1.93
LIMA1-208ENST00000551691 CCR8P51685 355 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 ARHGDIBP52566 201 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 CDH6P55285 790 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 DOC2AQ14183 400 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 GGTLC2Q14390 218 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 ABRAXAS2Q15018 415 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 PRMT9Q6P2P2 845 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 EMBQ6PCB8 327 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 UQCC3Q6UW78 93 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 ENPP6Q6UWR7 440 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 SSX9Q7RTT3 188 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 LRRC49Q8IUZ0 686 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 OFCC1Q8IZS5 231 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 TMEM156Q8N614 296 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 KIR3DL3Q8N743 410 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF525Q8N782 197 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF614Q8N883 585 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF321PQ8N8H1 164 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 TMEM35BQ8NCS4 154 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 OR9A4Q8NGU2 314 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 FNDC8Q8TC99 324 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 TMEM190Q8WZ59 177 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 C11orf52Q96A22 123 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 HAVCR1Q96D42 359 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 TMEM80Q96HE8 168 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF597Q96LX8 424 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF599Q96NL3 588 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 GSDMAQ96QA5 445 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 PEBP4Q96S96 227 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 FMO2Q99518 471 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 MAPKAP1Q9BPZ7 522 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 SLC35A5Q9BS91 424 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 C20orf24Q9BUV8 137 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 BARHL1Q9BZE3 327 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 NAT10Q9H0A0 1025 aaKnown RBP3.01□□□□□ -1.93
LIMA1-208ENST00000551691 PPDPFQ9H3Y8 114 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 RBKSQ9H477 322 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 METTL17Q9H7H0 456 aaPredicted RBP3.01□□□□□ -1.93
LIMA1-208ENST00000551691 JPT2Q9H910 190 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 AMBNQ9NP70 447 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 LZTFL1Q9NQ48 299 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 RBM22Q9NW64 420 aaKnown RBP eCLIP3.01□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF226Q9NYT6 803 aa3.01□□□□□ -1.93
LIMA1-208ENST00000551691 EHFQ9NZC4 300 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms