RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 OTX1P32242 354 aaPredicted RBP13.29□□□□□ -0.28
COX6A1-203ENST00000550009 SRP9P49458 86 aaKnown RBP13.29□□□□□ -0.28
COX6A1-203ENST00000550009 ACTG1P63261 375 aa13.29□□□□□ -0.28
COX6A1-203ENST00000550009 TRIM25Q14258 630 aaKnown RBP13.29□□□□□ -0.28
COX6A1-203ENST00000550009 MICAQ29983 383 aa13.29□□□□□ -0.28
COX6A1-203ENST00000550009 TUSC1Q2TAM9 212 aa13.29□□□□□ -0.28
COX6A1-203ENST00000550009 ZNF404Q494X3 552 aa13.29□□□□□ -0.28
COX6A1-203ENST00000550009 SFRP4Q6FHJ7 346 aaPredicted RBP13.29□□□□□ -0.28
COX6A1-203ENST00000550009 C12orf54Q6X4T0 127 aa13.29□□□□□ -0.28
COX6A1-203ENST00000550009 ZNF826PQ6ZT77 177 aa13.29□□□□□ -0.28
COX6A1-203ENST00000550009 PGAP1Q75T13 922 aa13.29□□□□□ -0.28
COX6A1-203ENST00000550009 ADGRG5Q8IZF4 528 aa13.29□□□□□ -0.28
COX6A1-203ENST00000550009 FGFRL1Q8N441 504 aa13.29□□□□□ -0.28
COX6A1-203ENST00000550009 BOLLQ8N9W6 283 aaKnown RBP13.29□□□□□ -0.28
COX6A1-203ENST00000550009 DACT3Q96B18 629 aaPredicted RBP13.29□□□□□ -0.28
COX6A1-203ENST00000550009 SLAMF6Q96DU3 332 aa13.29□□□□□ -0.28
COX6A1-203ENST00000550009 DDX28Q9NUL7 540 aaKnown RBP13.29□□□□□ -0.28
COX6A1-203ENST00000550009 ZNF319Q9P2F9 582 aa13.29□□□□□ -0.28
COX6A1-203ENST00000550009 CTSZQ9UBR2 303 aa13.29□□□□□ -0.28
COX6A1-203ENST00000550009 KCNG2Q9UJ96 466 aa13.29□□□□□ -0.28
COX6A1-203ENST00000550009 AUP1Q9Y679 476 aa13.29□□□□□ -0.28
COX6A1-203ENST00000550009 A0A0A6YYJ9 748 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 ENTPD1P49961 510 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 TPTEP56180 551 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 PAX8Q06710 450 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 ESCO2Q56NI9 601 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 SLC27A4Q6P1M0 643 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 ZNF841Q6ZN19 808 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 USP43Q70EL4 1123 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 MRPL21Q7Z2W9 205 aaKnown RBP13.28□□□□□ -0.28
COX6A1-203ENST00000550009 BPIFB2Q8N4F0 458 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 OR10G2Q8NGC3 310 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 OR6K6Q8NGW6 343 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 OR2T4Q8NH00 348 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 FAM216AQ8WUB2 273 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 FEVQ99581 238 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 COPS4Q9BT78 406 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 SSBP3Q9BWW4 388 aaPredicted RBP13.28□□□□□ -0.28
COX6A1-203ENST00000550009 RASSF4Q9H2L5 321 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 MAGIXQ9H6Y5 334 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 NDE1Q9NXR1 346 aa13.28□□□□□ -0.28
COX6A1-203ENST00000550009 PPIAL4EA0A075B759 164 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 PPIAL4CA0A0B4J2A2 164 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 DHRS12A0PJE2 317 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 TMEM89A2RUT3 159 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 C22orf46C9J442 243 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 PPIAL4DF5H284 164 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 PPIAL4FP0DN26 164 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 EGR1P18146 543 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 PRKACGP22612 351 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 GATA3P23771 443 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 CD200P41217 278 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 UBA52P62987 128 aaKnown RBP13.27□□□□□ -0.29
COX6A1-203ENST00000550009 ECH1Q13011 328 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 OR8G1Q15617 311 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 PCK2Q16822 640 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 SPATS1Q496A3 300 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 ARMCX4Q5H9R4 360 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 WDR86Q86TI4 376 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 OR56B2PQ8NGI1 322 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 CANT1Q8WVQ1 401 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 SPRYD4Q8WW59 207 aaPredicted RBP13.27□□□□□ -0.29
COX6A1-203ENST00000550009 THTPAQ9BU02 230 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 ADAT1Q9BUB4 502 aaKnown RBP13.27□□□□□ -0.29
COX6A1-203ENST00000550009 CHID1Q9BWS9 393 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 DGCR6LQ9BY27 220 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 REEP1Q9H902 201 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 DNAJC27Q9NZQ0 273 aa13.27□□□□□ -0.29
COX6A1-203ENST00000550009 IGHV3OR15-7A0A075B7D8 119 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 IGHV2-70DA0A0C4DH43 119 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 A0A1B0GW55 424 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 FAM107AO95990 144 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 DUX4L2P0CJ85 424 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 DUX4L3P0CJ86 424 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 DUX4L4P0CJ87 422 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 DUX4L5P0CJ88 424 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 DUX4L6P0CJ89 424 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 DUX4L7P0CJ90 424 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 FMO3P31513 532 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 GATA4P43694 442 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 SLC25A1P53007 311 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 GNB2P62879 340 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 MALLQ13021 153 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 KLHL12Q53G59 568 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 RPL13AP3Q6NVV1 102 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 DUX4L9Q6RFH8 374 aaPredicted RBP13.26□□□□□ -0.29
COX6A1-203ENST00000550009 DPY19L4Q7Z388 723 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 CCDC197Q8NCU1 140 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 GCDHQ92947 438 aaPredicted RBP13.26□□□□□ -0.29
COX6A1-203ENST00000550009 OTULINQ96BN8 352 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 SEH1LQ96EE3 360 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 SUCNR1Q9BXA5 334 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 SMURF1Q9HCE7 757 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 BRD7Q9NPI1 651 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 DUX4Q9UBX2 424 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 NUP50Q9UKX7 468 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 KLHDC2Q9Y2U9 406 aa13.26□□□□□ -0.29
COX6A1-203ENST00000550009 GGT3PA6NGU5 568 aa13.25□□□□□ -0.29
COX6A1-203ENST00000550009 DNAJC9-AS1A6NH13 148 aa13.25□□□□□ -0.29
COX6A1-203ENST00000550009 TRIM77I1YAP6 450 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms