RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 LGALS8O00214 317 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 DCTN6O00399 190 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 ADAM20O43506 726 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 HLA-DQA2P01906 255 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 MMP9P14780 707 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 NOS3P29474 1203 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 SLC6A6P31641 620 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 SLC7A2P52569 658 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 FXYD6P3P58550 94 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 MZT1Q08AG7 82 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 TRAP1Q12931 704 aaKnown RBP11.26□□□□□ -0.61
TROAP-211ENST00000549891 KRT72Q14CN4 511 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 MPPED2Q15777 294 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 CFAP77Q6ZQR2 320 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 LINC00346Q8IVM7 164 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 OR6V1Q8N148 313 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 SCCPDHQ8NBX0 429 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 FANK1Q8TC84 345 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 SPTSSAQ969W0 71 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 TBX15Q96SF7 602 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 ADAT1Q9BUB4 502 aaKnown RBP11.26□□□□□ -0.61
TROAP-211ENST00000549891 CTSZQ9UBR2 303 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 IGHV1-69DA0A0B4J2H0 117 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 OOEPA6NGQ2 149 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 M0R135 149 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 NME4O00746 187 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 ARPC3O15145 178 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 ECDO95905 644 aaPredicted RBP11.25□□□□□ -0.61
TROAP-211ENST00000549891 IGHV1-69P01742 117 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 CA6P23280 308 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 GGT2P36268 569 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 GSK3BP49841 420 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 PRSS12P56730 875 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 SMIM11AP58511 58 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 RFX4Q33E94 735 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 SFRP4Q6FHJ7 346 aaPredicted RBP11.25□□□□□ -0.61
TROAP-211ENST00000549891 TSEN54Q7Z6J9 526 aaKnown RBP11.25□□□□□ -0.61
TROAP-211ENST00000549891 ZBTB46Q86UZ6 589 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 BOLLQ8N9W6 283 aaKnown RBP11.25□□□□□ -0.61
TROAP-211ENST00000549891 SPERTQ8NA61 448 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 LRTOMTQ8WZ04 291 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 ZNF799Q96GE5 643 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 NMNAT3Q96T66 252 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 RBM4BQ9BQ04 359 aaKnown RBP11.25□□□□□ -0.61
TROAP-211ENST00000549891 KCTD14Q9BQ13 255 aaPredicted RBP11.25□□□□□ -0.61
TROAP-211ENST00000549891 DPAGT1Q9H3H5 408 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 EFCAB1Q9HAE3 211 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 RPRD1BQ9NQG5 326 aaKnown RBP11.25□□□□□ -0.61
TROAP-211ENST00000549891 ARGLU1Q9NWB6 273 aaPredicted RBP11.25□□□□□ -0.61
TROAP-211ENST00000549891 NDUFAF4Q9P032 175 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 ARMCX1Q9P291 453 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 GMPR2Q9P2T1 348 aaKnown RBP11.25□□□□□ -0.61
TROAP-211ENST00000549891 CYB5R1Q9UHQ9 305 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 KCNG2Q9UJ96 466 aa11.25□□□□□ -0.61
TROAP-211ENST00000549891 PRKDCP78527 4128 aaKnown RBP11.24□□□□□ -0.61
TROAP-211ENST00000549891 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.24□□□□□ -0.61
TROAP-211ENST00000549891 TRBV4-1A0A0J9YWV2 114 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 GGT3PA6NGU5 568 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 CD300LBA8K4G0 201 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 C3orf80F5H4A9 247 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 IDH3BO43837 385 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 GPR137BO60478 399 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 GMNNO75496 209 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 CLPXO76031 633 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 PTBP3O95758 552 aaKnown RBP11.24□□□□□ -0.61
TROAP-211ENST00000549891 SF3A3Q12874 501 aaKnown RBP eCLIP11.24□□□□□ -0.612e-7■■■■■ 49.4
TROAP-211ENST00000549891 TAF9Q16594 264 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 GDPGP1Q6ZNW5 385 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 NAA40Q86UY6 237 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 LDLRAD3Q86YD5 345 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 OR4C15Q8NGM1 316 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 LINC01006Q8NI28 216 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 LHX4Q969G2 390 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 IFT27Q9BW83 186 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 SIRPDQ9H106 197 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 OR52D1Q9H346 318 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 OPA3Q9H6K4 179 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 PNRC2Q9NPJ4 139 aaKnown RBP11.24□□□□□ -0.61
TROAP-211ENST00000549891 C14orf119Q9NWQ9 140 aa11.24□□□□□ -0.61
TROAP-211ENST00000549891 MRPL15Q9P015 296 aaKnown RBP11.24□□□□□ -0.61
TROAP-211ENST00000549891 SAMD4AQ9UPU9 718 aaKnown RBP11.24□□□□□ -0.61
TROAP-211ENST00000549891 CAB39Q9Y376 341 aaPredicted RBP11.24□□□□□ -0.61
TROAP-211ENST00000549891 BTBD17A6NE02 478 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 A6NLC8 198 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 COX4I1P13073 169 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 HIST1H1CP16403 213 aaKnown RBP11.23□□□□□ -0.61
TROAP-211ENST00000549891 ZNF823P16415 610 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 IER3P46695 156 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 SEC23BQ15437 767 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 ASPHD2Q6ICH7 369 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 CGB2Q6NT52 195 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 HACD2Q6Y1H2 254 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 BTN2A1Q7KYR7 527 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 RHOUQ7L0Q8 258 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 OR4K13Q8NH42 304 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 OR52J3Q8NH60 311 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 DHRS1Q96LJ7 313 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 NSRP1Q9H0G5 558 aaKnown RBP11.23□□□□□ -0.61
TROAP-211ENST00000549891 SMURF1Q9HCE7 757 aa11.23□□□□□ -0.61
TROAP-211ENST00000549891 TCF7L1Q9HCS4 588 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms