RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 PARP8Q8N3A8 854 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 OR13G1Q8NGZ3 307 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 ZNF420Q8TAQ5 688 aaPredicted RBP13.34□□□□□ -0.27
DDX54-205ENST00000548786 RAB1CQ92928 201 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 DVL3Q92997 716 aaPredicted RBP13.34□□□□□ -0.27
DDX54-205ENST00000548786 DUS3LQ96G46 650 aaKnown RBP13.34□□□□□ -0.27
DDX54-205ENST00000548786 CIB1Q99828 191 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 GAL3ST1Q99999 423 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 TTTY10Q9BZA0 68 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 ZNF665Q9H7R5 613 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 TMEM106BQ9NUM4 274 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 PPP1R3CQ9UQK1 317 aa13.34□□□□□ -0.27
DDX54-205ENST00000548786 GGT3PA6NGU5 568 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 EBAG9O00559 213 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 PRODHO43272 600 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 ZNF205O95201 554 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 H2BFMP0C1H6 154 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 SBK2P0C263 348 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 TNFRSF1AP19438 455 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 SLC2A5P22732 501 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 CA6P23280 308 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 SLC15A1P46059 708 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 LMO4P61968 165 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 GRB2P62993 217 aaKnown RBP13.33□□□□□ -0.28
DDX54-205ENST00000548786 CR1LQ2VPA4 569 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 KDM4DQ6B0I6 523 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 FAM57BQ71RH2 274 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 SHFQ7M4L6 423 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 RNF133Q8WVZ7 376 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 MEGF10Q96KG7 1140 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 PKP2Q99959 881 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 SLC30A2Q9BRI3 323 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 GABARAPL1Q9H0R8 117 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 RIBC2Q9H4K1 309 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 MARCH7Q9H992 704 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 TMEM100Q9NV29 134 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 IL19Q9UHD0 177 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 CDC42EP3Q9UKI2 254 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 DYSFO75923 2080 aa13.33□□□□□ -0.28
DDX54-205ENST00000548786 CCDC182A6NF36 153 aa13.32□□□□□ -0.28
DDX54-205ENST00000548786 CD300LBA8K4G0 201 aa13.32□□□□□ -0.28
DDX54-205ENST00000548786 B4DSR2 109 aa13.32□□□□□ -0.28
DDX54-205ENST00000548786 PSMD9O00233 223 aa13.32□□□□□ -0.28
DDX54-205ENST00000548786 LYNP07948 512 aa13.32□□□□□ -0.28
DDX54-205ENST00000548786 POLR2IP36954 125 aaKnown RBP13.32□□□□□ -0.28
DDX54-205ENST00000548786 MMP16P51512 607 aa13.32□□□□□ -0.28
DDX54-205ENST00000548786 ZNF121P58317 390 aaPredicted RBP13.32□□□□□ -0.28
DDX54-205ENST00000548786 ESRRGP62508 458 aa13.32□□□□□ -0.28
DDX54-205ENST00000548786 LRRN1Q6UXK5 716 aa13.32□□□□□ -0.28
DDX54-205ENST00000548786 PEG10Q86TG7 708 aaKnown RBP13.32□□□□□ -0.28
DDX54-205ENST00000548786 MOGAT3Q86VF5 341 aa13.32□□□□□ -0.28
DDX54-205ENST00000548786 TCEANCQ8N8B7 351 aa13.32□□□□□ -0.28
DDX54-205ENST00000548786 OTOSQ8NHW6 89 aa13.32□□□□□ -0.28
DDX54-205ENST00000548786 CENPNQ96H22 339 aaPredicted RBP13.32□□□□□ -0.28
DDX54-205ENST00000548786 IL4I1Q96RQ9 567 aa13.32□□□□□ -0.28
DDX54-205ENST00000548786 GCM1Q9NP62 436 aa13.32□□□□□ -0.28
DDX54-205ENST00000548786 TMEFF2Q9UIK5 374 aaPredicted RBP13.32□□□□□ -0.28
DDX54-205ENST00000548786 CUBNO60494 3623 aa13.32□□□□□ -0.28
DDX54-205ENST00000548786 CYB5R3P00387 301 aaPredicted RBP13.31□□□□□ -0.28
DDX54-205ENST00000548786 IGHV2-5P01817 119 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 MSMBP08118 114 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 OPRL1P41146 370 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 SRP9P49458 86 aaKnown RBP13.31□□□□□ -0.28
DDX54-205ENST00000548786 ACTR3P61158 418 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 SLC3A1Q07837 685 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 TIGD6Q17RP2 521 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 SLC35D3Q5M8T2 416 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 PRAMEF6Q5VXH4 476 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 SLX4IPQ5VYV7 408 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 GLCCI1Q86VQ1 547 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.31□□□□□ -0.28
DDX54-205ENST00000548786 OR56B2PQ8NGI1 322 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 ADAT1Q9BUB4 502 aaKnown RBP13.31□□□□□ -0.28
DDX54-205ENST00000548786 UFSP2Q9NUQ7 469 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 HIF1ANQ9NWT6 349 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 LAMP5Q9UJQ1 280 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 NPTNQ9Y639 398 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 MXRA5Q9NR99 2828 aa13.31□□□□□ -0.28
DDX54-205ENST00000548786 ZAR1LA6NP61 321 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 H3BNX3 289 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 SRD5A1P18405 259 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 HNF1AP20823 631 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 RAD23AP54725 363 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 HOXA4Q00056 320 aaPredicted RBP13.3□□□□□ -0.28
DDX54-205ENST00000548786 ZMYND11Q15326 602 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 OR8G1Q15617 311 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 KRTAP21-3Q3LHN1 58 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 FAM201AQ5SY85 155 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 LCN1P1Q5VSP4 162 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 ZNF454Q8N9F8 522 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 OR51F2Q8NH61 342 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 TMEM186Q96B77 213 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 RAB39BQ96DA2 213 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 C1orf159Q96HA4 380 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 REEP6Q96HR9 211 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 PGAM5Q96HS1 289 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 SIGLEC11Q96RL6 698 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 TEAD3Q99594 435 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 REPIN1Q9BWE0 567 aaKnown RBP13.3□□□□□ -0.28
DDX54-205ENST00000548786 PRRG3Q9BZD7 231 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms