RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 KLK13Q9UKR3 277 aa10.49□□□□□ -0.73
CCDC38-202ENST00000546386 CDV3Q9UKY7 258 aaKnown RBP10.49□□□□□ -0.73
CCDC38-202ENST00000546386 A0A1B0GTI1 187 aa10.49□□□□□ -0.73
CCDC38-202ENST00000546386 MAPK3P27361 379 aaPredicted RBP10.49□□□□□ -0.73
CCDC38-202ENST00000546386 OR3A4PP47883 348 aa10.49□□□□□ -0.73
CCDC38-202ENST00000546386 BLVRAP53004 296 aa10.49□□□□□ -0.73
CCDC38-202ENST00000546386 PCK2Q16822 640 aa10.49□□□□□ -0.73
CCDC38-202ENST00000546386 TMEM81Q6P7N7 255 aa10.49□□□□□ -0.73
CCDC38-202ENST00000546386 BRICD5Q6PL45 260 aa10.49□□□□□ -0.73
CCDC38-202ENST00000546386 TMEM104Q8NE00 496 aa10.49□□□□□ -0.73
CCDC38-202ENST00000546386 OR6S1Q8NH40 331 aa10.49□□□□□ -0.73
CCDC38-202ENST00000546386 S100A16Q96FQ6 103 aaKnown RBP10.49□□□□□ -0.73
CCDC38-202ENST00000546386 PLEKHA1Q9HB21 404 aa10.49□□□□□ -0.73
CCDC38-202ENST00000546386 ZNF275Q9NSD4 429 aaPredicted RBP10.49□□□□□ -0.73
CCDC38-202ENST00000546386 ZNF629Q9UEG4 869 aaPredicted RBP10.49□□□□□ -0.73
CCDC38-202ENST00000546386 STEAP1Q9UHE8 339 aa10.49□□□□□ -0.73
CCDC38-202ENST00000546386 FOXJ3Q9UPW0 622 aa10.49□□□□□ -0.73
CCDC38-202ENST00000546386 A0A1B0GVI7 797 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 LCATP04180 440 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 HCKP08631 526 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 CD79AP11912 226 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 HTR2CP28335 458 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 HIKESHIQ53FT3 197 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 UBE2NLQ5JXB2 153 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 CHMP1BQ7LBR1 199 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 SLC16A14Q7RTX9 510 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 ZNF101Q8IZC7 436 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 CHST4Q8NCG5 386 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 CPEB3Q8NE35 698 aaKnown RBP10.48□□□□□ -0.73
CCDC38-202ENST00000546386 OR4S1Q8NGB4 309 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 GPER1Q99527 375 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 FOXB1Q99853 325 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 B4GALT7Q9UBV7 327 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 TMEM235A6NFC5 223 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 GJE1A6NN92 205 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 PDCD5O14737 125 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 PDGFAP04085 211 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 ZNF20P17024 532 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 BTCP35070 178 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 EIF2S3P41091 472 aaKnown RBP10.48□□□□□ -0.73
CCDC38-202ENST00000546386 HTR5AP47898 357 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 MMP16P51512 607 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 UBE2MP61081 183 aaKnown RBP10.48□□□□□ -0.73
CCDC38-202ENST00000546386 PSG4Q00888 419 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 ASAH1Q13510 395 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 RAB11BQ15907 218 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 AKAP14Q86UN6 197 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 ANGPTL5Q86XS5 388 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 C20orf196Q8IYI0 205 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 MDS2Q8NDY4 140 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 OR10A4Q9H209 315 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 RNF121Q9H920 327 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 ABRACLQ9P1F3 81 aa10.48□□□□□ -0.73
CCDC38-202ENST00000546386 KLRC4-KLRK1H3BQV0 150 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 M0R135 149 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 SGCEO43556 437 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 ANGPTL7O43827 346 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 NME2P1O60361 137 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 CTAG2O75638 210 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 HRGP04196 525 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 LIPCP11150 499 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 NME2P22392 152 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 HLA-DMAP28067 261 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 TNFSF10P50591 281 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 TAS2R20P59543 309 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 ARF1P84077 181 aaKnown RBP10.47□□□□□ -0.73
CCDC38-202ENST00000546386 CLN3Q13286 438 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 SNTB2Q13425 540 aaKnown RBP10.47□□□□□ -0.73
CCDC38-202ENST00000546386 HLXQ14774 488 aaPredicted RBP10.47□□□□□ -0.73
CCDC38-202ENST00000546386 TBRG1Q3YBR2 411 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 SPATA46Q5T0L3 261 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 GLRX5Q86SX6 157 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 ELMOD2Q8IZ81 293 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 GVQW1Q8N7I0 195 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 TMEM54Q969K7 222 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 ZNF799Q96GE5 643 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 RADILQ96JH8 1075 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 SNX18Q96RF0 628 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 NOX3Q9HBY0 568 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 FANCFQ9NPI8 374 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 RBFOX1Q9NWB1 397 aaKnown RBP10.47□□□□□ -0.73
CCDC38-202ENST00000546386 ALG5Q9Y673 324 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 CACNG2Q9Y698 323 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 ZFYVE26Q68DK2 2539 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 IGKV1-9A0A0C4DH69 117 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 ZNF587BE7ETH6 402 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 ZNF205O95201 554 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 CFL1P23528 166 aaKnown RBP10.47□□□□□ -0.73
CCDC38-202ENST00000546386 ACKR3P25106 362 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 CCR9P51686 369 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 PYHIN1Q6K0P9 492 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 SLC22A24Q8N4F4 322 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 CNEP1R1Q8N9A8 125 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 KCNE4Q8WWG9 221 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 MAFIPQ8WZ33 124 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 PHF21AQ96BD5 680 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 NTNG2Q96CW9 530 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 MNTQ99583 582 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 KCNJ15Q99712 375 aa10.47□□□□□ -0.73
CCDC38-202ENST00000546386 GPR173Q9NS66 373 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms