RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 B3GALT5Q9Y2C3 310 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 PCNX1Q96RV3 2341 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 CCDC163A0A0D9SF12 145 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 P2RY10O00398 339 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 NDUFB3O43676 98 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 GPRIN2O60269 458 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 GAAP10253 952 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 CPEP16870 476 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 IRF3Q14653 427 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 ZXDCQ2QGD7 858 aaPredicted RBP7.77□□□□□ -1.17
CLIP1-218ENST00000545889 DPY19L2P2Q6ZN68 376 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 CBLL1Q75N03 491 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 SEMA6DQ8NFY4 1073 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 RIMS4Q9H426 269 aaPredicted RBP7.77□□□□□ -1.17
CLIP1-218ENST00000545889 MEIKINA0A087WXM9 373 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 GABARAPH6UMI1 98 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 S100A8P05109 93 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 ADH4P08319 380 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 EPHA2P29317 976 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 RAB40BQ12829 278 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 CEACAM16Q2WEN9 425 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 FHL5Q5TD97 284 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 ETFRF1Q6IPR1 90 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 FAM71E1Q6IPT2 247 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 SERPINA12Q8IW75 414 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 OR4Q3Q8NH05 313 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 FNDC9Q8TBE3 224 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 CCL17Q92583 94 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 ZBTB8AQ96BR9 441 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 OXGR1Q96P68 337 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 SDF2Q99470 211 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 DDOQ99489 341 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 GINS3Q9BRX5 216 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 SRRQ9GZT4 340 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 LAT2Q9GZY6 243 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 EMC7Q9NPA0 242 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 HEYLQ9NQ87 328 aaPredicted RBP7.76□□□□□ -1.17
CLIP1-218ENST00000545889 PTTG3PQ9NZH4 202 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 ELF5Q9UKW6 265 aaPredicted RBP7.76□□□□□ -1.17
CLIP1-218ENST00000545889 ZFC3H1O60293 1989 aaKnown RBP7.76□□□□□ -1.17
CLIP1-218ENST00000545889 FAM208BQ5VWN6 2430 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 SOCS6O14544 535 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 P2RX6O15547 441 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 DHHO43323 396 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 CD34P28906 385 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 OPRM1P35372 400 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 PDZK1IP1Q13113 114 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 MPPED2Q15777 294 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 LRRC10Q5BKY1 277 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 NAA40Q86UY6 237 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 CARFQ8N187 725 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 ACBD4Q8NC06 268 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 GGHQ92820 318 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 AKR1E2Q96JD6 320 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 KCNJ15Q99712 375 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 WWTR1Q9GZV5 400 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 ACKR4Q9NPB9 350 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 BABAM2Q9NXR7 383 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 MRPS28Q9Y2Q9 187 aaKnown RBP7.76□□□□□ -1.17
CLIP1-218ENST00000545889 ROS1P08922 2347 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 A0A1B0GV50 99 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 M0R135 149 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 TOX3O15405 576 aaPredicted RBP7.76□□□□□ -1.17
CLIP1-218ENST00000545889 TUSC2O75896 110 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 APEHP13798 732 aaKnown RBP7.76□□□□□ -1.17
CLIP1-218ENST00000545889 PRF1P14222 555 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 B4GALT1P15291 398 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 BSGP35613 385 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 GNB1P62873 340 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 TBCEQ15813 527 aaPredicted RBP7.76□□□□□ -1.17
CLIP1-218ENST00000545889 ALKBH6Q3KRA9 238 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 COX20Q5RI15 118 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 MBOAT2Q6ZWT7 520 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 GABRG1Q8N1C3 465 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 SVBPQ8N300 66 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 TMEM106AQ96A25 262 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 DAZAP1Q96EP5 407 aaKnown RBP7.76□□□□□ -1.17
CLIP1-218ENST00000545889 ZNF799Q96GE5 643 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 INPP5EQ9NRR6 644 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 TNFRSF19Q9NS68 423 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 OCIAD1Q9NX40 245 aa7.76□□□□□ -1.17
CLIP1-218ENST00000545889 NDUFA2O43678 99 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 H2AFB2P0C5Z0 115 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 GIFP27352 417 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 RAC1P63000 192 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 GK2Q14410 553 aaPredicted RBP7.75□□□□□ -1.17
CLIP1-218ENST00000545889 RNPS1Q15287 305 aaKnown RBP7.75□□□□□ -1.17
CLIP1-218ENST00000545889 NKG7Q16617 165 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 BTNL3Q6UXE8 466 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 RELL2Q8NC24 303 aaPredicted RBP7.75□□□□□ -1.17
CLIP1-218ENST00000545889 OR10K1Q8NGX5 313 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 TSSK2Q96PF2 358 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 SUCNR1Q9BXA5 334 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 KCNE1BA0A087WTH5 132 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 TMEM212A6NML5 194 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 EIF3GO75821 320 aaKnown RBP eCLIP7.75□□□□□ -1.17
CLIP1-218ENST00000545889 CFDP00746 253 aaPredicted RBP7.75□□□□□ -1.17
CLIP1-218ENST00000545889 CYCSP99999 105 aaKnown RBP7.75□□□□□ -1.17
CLIP1-218ENST00000545889 SFRP5Q5T4F7 317 aa7.75□□□□□ -1.17
CLIP1-218ENST00000545889 SLC16A9Q7RTY1 509 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms