RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 HSPB2Q16082 182 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 MOGAT2Q3SYC2 334 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 SLC36A2Q495M3 483 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 TMEM255AQ5JRV8 349 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 PDSS1Q5T2R2 415 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 C3P1Q6ZMU1 363 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 OR52I2Q8NH67 350 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 HPS1Q92902 700 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 CMBLQ96DG6 245 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 ZNF799Q96GE5 643 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 ZDHHC11Q9H8X9 412 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 ZNF224Q9NZL3 707 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 A0A1W2PP11 408 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 ACOT7O00154 380 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 LYRM1O43325 122 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 MT-ND4P03905 459 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 HTR5AP47898 357 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 PTH2RP49190 550 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 ZNF133P52736 654 aaPredicted RBP11.96□□□□□ -0.49
HCFC2-202ENST00000544223 ASAH1Q13510 395 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 GPR176Q14439 515 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 RAB11BQ15907 218 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 TMEM69Q5SWH9 247 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 ZNF544Q6NX49 715 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 DRAXINQ8NBI3 349 aaPredicted RBP11.96□□□□□ -0.49
HCFC2-202ENST00000544223 HAVCR2Q8TDQ0 301 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 SLC25A28Q96A46 364 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 OR51B6Q9H340 312 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 RCE1Q9Y256 329 aa11.96□□□□□ -0.49
HCFC2-202ENST00000544223 ZNF891A8MT65 544 aaPredicted RBP11.96□□□□□ -0.5
HCFC2-202ENST00000544223 HTR2CP28335 458 aa11.96□□□□□ -0.5
HCFC2-202ENST00000544223 CCR6P51684 374 aa11.96□□□□□ -0.5
HCFC2-202ENST00000544223 ART1P52961 327 aa11.96□□□□□ -0.5
HCFC2-202ENST00000544223 HIKESHIQ53FT3 197 aa11.96□□□□□ -0.5
HCFC2-202ENST00000544223 FOXL2NBQ6ZUU3 175 aa11.96□□□□□ -0.5
HCFC2-202ENST00000544223 SIAH3Q8IW03 269 aa11.96□□□□□ -0.5
HCFC2-202ENST00000544223 BEX2Q9BXY8 128 aa11.96□□□□□ -0.5
HCFC2-202ENST00000544223 WNT5BQ9H1J7 359 aa11.96□□□□□ -0.5
HCFC2-202ENST00000544223 ABCG5Q9H222 651 aa11.96□□□□□ -0.5
HCFC2-202ENST00000544223 ACKR4Q9NPB9 350 aa11.96□□□□□ -0.5
HCFC2-202ENST00000544223 PAQR5Q9NXK6 330 aaPredicted RBP11.96□□□□□ -0.5
HCFC2-202ENST00000544223 IGKV1-9A0A0C4DH69 117 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 SYNGR3O43761 229 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 ZNF20P17024 532 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 MCEMP1Q8IX19 187 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 CPT1CQ8TCG5 803 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 UPRTQ96BW1 309 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 MS4A3Q96HJ5 214 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 TRIB1Q96RU8 372 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 NIPAL2Q9H841 368 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 SLC22A20A6NK97 555 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 SLC17A2O00624 439 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 ORC5O43913 435 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 GFRA3O60609 400 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 UBL3O95164 117 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 YES1P07947 543 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 ARSBP15848 533 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 ACKR3P25106 362 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 MAP2K3P46734 347 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 PABPC1L2AQ5JQF8 200 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 SFRP4Q6FHJ7 346 aaPredicted RBP11.95□□□□□ -0.5
HCFC2-202ENST00000544223 ZNF100Q8IYN0 542 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 BATF2Q8N1L9 274 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 OR1M1Q8NGA1 313 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 ENKURQ8TC29 256 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 S100A16Q96FQ6 103 aaKnown RBP11.95□□□□□ -0.5
HCFC2-202ENST00000544223 FAM117AQ9C073 453 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 SLC22A4Q9H015 551 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 ATG5Q9H1Y0 275 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 BEX1Q9HBH7 125 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 UPB1Q9UBR1 384 aa11.95□□□□□ -0.5
HCFC2-202ENST00000544223 IGKV3D-15A0A087WSY6 115 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 CTAG2O75638 210 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 LCATP04180 440 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 CD79AP11912 226 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 OR3A4PP47883 348 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 GRB2P62993 217 aaKnown RBP11.94□□□□□ -0.5
HCFC2-202ENST00000544223 PYHIN1Q6K0P9 492 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 IGF2-ASQ6U949 168 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 ACBD4Q8NC06 268 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 OR1F12Q8NHA8 337 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 APH1AQ96BI3 265 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 SGK3Q96BR1 496 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 OR2H1Q9GZK4 316 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 RNF121Q9H920 327 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 PLEKHA1Q9HB21 404 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 TRAV6A0A075B6T7 132 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 TRAV18A0A075B6X5 111 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 FAM240BA0A1B0GVZ2 78 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 ZNF587BE7ETH6 402 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 PLATP00750 562 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 NR2C1P13056 603 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 BTCP35070 178 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 GDNFP39905 211 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 NKX2-5P52952 324 aaPredicted RBP11.94□□□□□ -0.5
HCFC2-202ENST00000544223 TAS2R20P59543 309 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 HIST1H3AP68431 136 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 HIST2H3PS2Q5TEC6 136 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 FAM166AQ6J272 317 aa11.94□□□□□ -0.5
HCFC2-202ENST00000544223 HIST2H3AQ71DI3 136 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms