RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 ZNF708P17019 499 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 FCGR2CP31995 323 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 SLC9A3R2Q15599 337 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 RPUSD3Q6P087 351 aaKnown RBP16.3■□□□□ 0.2
CCT4-204ENST00000544079 KCTD18Q6PI47 426 aaPredicted RBP16.3■□□□□ 0.2
CCT4-204ENST00000544079 CHST4Q8NCG5 386 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 BEND2Q8NDZ0 799 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 OR5T3Q8NGG3 340 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 SMARCD2Q92925 531 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 NOL4LQ96MY1 436 aaPredicted RBP16.3■□□□□ 0.2
CCT4-204ENST00000544079 PLEKHA2Q9HB19 425 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 TCFL5Q9UL49 500 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 ZDHHC8Q9ULC8 765 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 TGOLN2O43493 480 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 PMP2P02689 132 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 ISG15P05161 165 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 S100A10P60903 97 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 RNF4P78317 190 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 SLC22A6Q4U2R8 563 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 KREMEN2Q8NCW0 462 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 RHBDD1Q8TEB9 315 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 TSPAN32Q96QS1 320 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 NKX3-1Q99801 234 aaPredicted RBP16.3■□□□□ 0.2
CCT4-204ENST00000544079 SIRT7Q9NRC8 400 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 SUSD2Q9UGT4 822 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 SPACA6W5XKT8 324 aa16.3■□□□□ 0.2
CCT4-204ENST00000544079 HIST1H2BKO60814 126 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 HIST1H2BJP06899 126 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 HIST1H2BOP23527 126 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 HIST1H2BBP33778 126 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 ZNF84P51523 738 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 HIST1H2BDP58876 126 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 HIST1H2BCP62807 126 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 BTG2P78543 158 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 QRFPP83859 136 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 ID2Q02363 134 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 ZNHIT3Q15649 155 aaPredicted RBP16.29■□□□□ 0.2
CCT4-204ENST00000544079 UBE2V2Q15819 145 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 HIST2H2BEQ16778 126 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 KHDC3LQ587J8 217 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.29■□□□□ 0.2
CCT4-204ENST00000544079 CLEC9AQ6UXN8 241 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.29■□□□□ 0.2
CCT4-204ENST00000544079 OR4D6Q8NGJ1 314 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 OR51A2Q8NGJ7 313 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 HIST1H2BHQ93079 126 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 NTNG2Q96CW9 530 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 MISP3Q96FF7 219 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 HIST1H2BNQ99877 126 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 HIST1H2BMQ99879 126 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 GINS3Q9BRX5 216 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 MMP25Q9NPA2 562 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 C19orf12Q9NSK7 152 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 KCNIP3Q9Y2W7 256 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 FGF17O60258 216 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 IGKV1D-16P01601 117 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 TMEM33P57088 247 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 SLC35A1P78382 337 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 SOHLH1Q5JUK2 328 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 C5orf34Q96MH7 638 aa16.29■□□□□ 0.2
CCT4-204ENST00000544079 SNRNP200O75643 2136 aaKnown RBP16.28■□□□□ 0.2
CCT4-204ENST00000544079 SCN5AQ14524 2016 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 ZNF726A6NNF4 738 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 DEDDO75618 318 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 PCCBP05166 539 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 CT62P0C5K7 136 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 RNH1P13489 461 aaKnown RBP16.28■□□□□ 0.2
CCT4-204ENST00000544079 S1PR1P21453 382 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 CAMLGP49069 296 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 PPM1FP49593 454 aaPredicted RBP16.28■□□□□ 0.2
CCT4-204ENST00000544079 NUTF2P61970 127 aaKnown RBP16.28■□□□□ 0.2
CCT4-204ENST00000544079 NKX6-1P78426 367 aaPredicted RBP16.28■□□□□ 0.2
CCT4-204ENST00000544079 PSG6Q00889 435 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 SPOCK1Q08629 439 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 SPEM2Q0P670 501 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 FAM53BQ14153 422 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 ZNF674Q2M3X9 581 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 DEFB134Q4QY38 66 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 CCDC54Q8NEL0 328 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 OR13C3Q8NGS6 347 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 DOK4Q8TEW6 326 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 RTBDNQ9BSG5 229 aaPredicted RBP16.28■□□□□ 0.2
CCT4-204ENST00000544079 MRPL37Q9BZE1 423 aaKnown RBP16.28■□□□□ 0.2
CCT4-204ENST00000544079 PISDQ9UG56 409 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 BORCS7-ASMTA0A0B4J1R7 106 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 NME2P1O60361 137 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 ADH1CP00326 375 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 CHRM2P08172 466 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 GSTP1P09211 210 aaKnown RBP16.28■□□□□ 0.2
CCT4-204ENST00000544079 RAB4AP20338 218 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 HSD11B1P28845 292 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 GDI1P31150 447 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 RPS27P42677 84 aaKnown RBP16.28■□□□□ 0.2
CCT4-204ENST00000544079 ZNF616Q08AN1 781 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 TCTN1Q2MV58 587 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 SPNS3Q6ZMD2 512 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 LHFPL1Q86WI0 220 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 ST7LQ8TDW4 575 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 PRRX2Q99811 253 aa16.28■□□□□ 0.2
CCT4-204ENST00000544079 TUBD1Q9UJT1 453 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms