RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 SHEQ5VZ18 495 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 PRSS57Q6UWY2 283 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 Q6ZR03 302 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 PLEKHG7Q6ZR37 379 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 C8orf59Q8N0T1 100 aaPredicted RBP12.87□□□□□ -0.35
CD9-210ENST00000543916 OR5AS1Q8N127 324 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 PGAM5Q96HS1 289 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 RAB1BQ9H0U4 201 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 VCX3BQ9H321 246 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 MSL2Q9HCI7 577 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 FAM206AQ9NX38 181 aa12.87□□□□□ -0.35
CD9-210ENST00000543916 CELSR1Q9NYQ6 3014 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 PLSCR5A0PG75 271 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 IQCF6A8MYZ5 107 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 XRCC2O43543 280 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 LILRA1O75019 489 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 SRSF10O75494 262 aaKnown RBP12.86□□□□□ -0.35
CD9-210ENST00000543916 NCR1O76036 304 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 DCTDP32321 178 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 MAGEB1P43366 347 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 MFGE8Q08431 387 aaPredicted RBP12.86□□□□□ -0.35
CD9-210ENST00000543916 LAIR2Q6ISS4 152 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 IZUMO2Q6UXV1 221 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 SPNS3Q6ZMD2 512 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 DNM1P46Q6ZS02 220 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 PGAP1Q75T13 922 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 MRPL21Q7Z2W9 205 aaKnown RBP12.86□□□□□ -0.35
CD9-210ENST00000543916 ZNF525Q8N782 197 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 BHLHE23Q8NDY6 225 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 SPSB4Q96A44 273 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 Q96MF0 132 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 REPIN1Q9BWE0 567 aaKnown RBP12.86□□□□□ -0.35
CD9-210ENST00000543916 SP140LQ9H930 580 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 MYRFQ9Y2G1 1151 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 RPL36Q9Y3U8 105 aaKnown RBP12.86□□□□□ -0.35
CD9-210ENST00000543916 HSPE1-MOB4S4R3N1 261 aa12.86□□□□□ -0.35
CD9-210ENST00000543916 TMEM269A0A1B0GVZ9 245 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 DAPL1A0PJW8 107 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 SPRY3O43610 288 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 PNPP00491 289 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 IGHV1-46P01743 117 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 MT-ND5P03915 603 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 ERCC1P07992 297 aaPredicted RBP12.85□□□□□ -0.35
CD9-210ENST00000543916 ACTC1P68032 377 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 ACTA1P68133 377 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 CCL8P80075 99 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 CDK5R2Q13319 367 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 TIGD6Q17RP2 521 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 CLEC12BQ2HXU8 276 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 GFOD2Q3B7J2 385 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 OR8B12Q8NGG6 310 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 OR52H1Q8NGJ2 320 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 OR52I1Q8NGK6 324 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 FBLIM1Q8WUP2 373 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 NEU4Q8WWR8 484 aaPredicted RBP12.85□□□□□ -0.35
CD9-210ENST00000543916 SGK3Q96BR1 496 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 REEP6Q96HR9 211 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 RHNO1Q9BSD3 238 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 CYSLTR2Q9NS75 346 aa12.85□□□□□ -0.35
CD9-210ENST00000543916 MRPS18AQ9NVS2 196 aaKnown RBP12.85□□□□□ -0.35
CD9-210ENST00000543916 CGGBP1Q9UFW8 167 aaPredicted RBP12.85□□□□□ -0.35
CD9-210ENST00000543916 ITPR3Q14573 2671 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 TANC2Q9HCD6 1990 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 METTL15A6NJ78 407 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 IGHA1P01876 353 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 HPXP02790 462 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 KRT8P05787 483 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 ADH4P08319 380 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 SELEP16581 610 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 LIPAP38571 399 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 MMP16P51512 607 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 RAB40BQ12829 278 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 TSTQ16762 297 aaKnown RBP12.84□□□□□ -0.35
CD9-210ENST00000543916 ZNF829Q3KNS6 432 aaPredicted RBP12.84□□□□□ -0.35
CD9-210ENST00000543916 TP53I3Q53FA7 332 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 ACBD7Q8N6N7 88 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 YIPF7Q8N8F6 280 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 OR8G5Q8NG78 346 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 PPP1R14AQ96A00 147 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 LYZL4Q96KX0 146 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 OR10A2Q9H208 303 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 OPA3Q9H6K4 179 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 NKIRAS2Q9NYR9 191 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 PCDHGB1Q9Y5G3 927 aa12.84□□□□□ -0.35
CD9-210ENST00000543916 hCG_38984A0A1B0GV85 526 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 GGT3PA6NGU5 568 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 ACOD1A6NK06 481 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 CD300LBA8K4G0 201 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 LOC110117498-PIK3R3F6TDL0 507 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 LYNX1G3V0Z9 82 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 H0YL77 283 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 MLNRO43193 412 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 SULT1C4O75897 302 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 RPP14O95059 124 aaKnown RBP12.83□□□□□ -0.36
CD9-210ENST00000543916 FADS2O95864 444 aaKnown RBP12.83□□□□□ -0.36
CD9-210ENST00000543916 LYNX1P0DP58 116 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 DAOP14920 347 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 VHLP40337 213 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 FAM3AP98173 230 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 TNK1Q13470 666 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms