RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 MYOTQ9UBF9 498 aa10.15□□□□□ -0.79
CDH4-201ENST00000543233 KCNG2Q9UJ96 466 aa10.15□□□□□ -0.79
CDH4-201ENST00000543233 ZNF724A8MTY0 619 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 CTNSO60931 367 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 ARL6IP5O75915 188 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 PPP1R3DO95685 299 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 PMS2P2O95744 297 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 GALP22466 123 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 ERVFC1-1P60608 527 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 CDK5Q00535 292 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 OR6N1Q8NGY5 312 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 Q8WTZ3 238 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 FRZBQ92765 325 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 ADGRG7Q96K78 797 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 LMF1Q96S06 567 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 UTP23Q9BRU9 249 aaKnown RBP10.14□□□□□ -0.79
CDH4-201ENST00000543233 GPR87Q9BY21 358 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 LMAN1LQ9HAT1 526 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.14□□□□□ -0.79
CDH4-201ENST00000543233 MRPS18AQ9NVS2 196 aaKnown RBP10.14□□□□□ -0.79
CDH4-201ENST00000543233 HDGFL3Q9Y3E1 203 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 WDR45Q9Y484 360 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 HS3ST3B1Q9Y662 390 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 TEX13DA0A0J9YY54 714 aaPredicted RBP10.14□□□□□ -0.79
CDH4-201ENST00000543233 CD8AP01732 235 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 CD3DP04234 171 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 SLC35G6P0C7Q6 338 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 ITPKBP27987 946 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 CTHP32929 405 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 SLC37A1P57057 533 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 SMIM11AP58511 58 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 GPR18Q14330 331 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 MRM1Q6IN84 353 aaKnown RBP10.14□□□□□ -0.79
CDH4-201ENST00000543233 TEX38Q6PEX7 206 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 ZNF573Q86YE8 665 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 MRPL41Q8IXM3 137 aaKnown RBP10.14□□□□□ -0.79
CDH4-201ENST00000543233 NRMQ8IXM6 262 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 PNLDC1Q8NA58 520 aaKnown RBP10.14□□□□□ -0.79
CDH4-201ENST00000543233 NUDT11Q96G61 164 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 SLC35A4Q96G79 324 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 FBXO34Q9NWN3 711 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 UPB1Q9UBR1 384 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 V9GYS6 101 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 ASXL3Q9C0F0 2248 aa10.14□□□□□ -0.79
CDH4-201ENST00000543233 DVL1O14640 695 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 OGG1O15527 345 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 NT5EP21589 574 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 BMI1P35226 326 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 TAGLN2P37802 199 aaKnown RBP10.13□□□□□ -0.79
CDH4-201ENST00000543233 OR12D2P58182 307 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 RAB1AP62820 205 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 ACSM1Q08AH1 577 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 EXOSC7Q15024 291 aaKnown RBP10.13□□□□□ -0.79
CDH4-201ENST00000543233 ZIC1Q15915 447 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 NNATQ16517 81 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 GUK1Q16774 197 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 TMEM92Q6UXU6 159 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 METTL21AQ8WXB1 218 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 CDV3Q9UKY7 258 aaKnown RBP10.13□□□□□ -0.79
CDH4-201ENST00000543233 PRKNO60260 465 aaPredicted RBP10.13□□□□□ -0.79
CDH4-201ENST00000543233 ZIC2O95409 532 aaPredicted RBP10.13□□□□□ -0.79
CDH4-201ENST00000543233 CTSBP07858 339 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 AKAIN1P0CW23 69 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 FRKP42685 505 aaPredicted RBP10.13□□□□□ -0.79
CDH4-201ENST00000543233 DHRS2Q13268 280 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 RUNX2Q13950 521 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 FAM199XQ6PEV8 388 aaPredicted RBP10.13□□□□□ -0.79
CDH4-201ENST00000543233 EID2Q8N6I1 236 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 TMEM104Q8NE00 496 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 TMEM255BQ8WV15 326 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 MRGPRX1Q96LB2 322 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 BMFQ96LC9 184 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 MCHR1Q99705 422 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 RAB11FIP5Q9BXF6 653 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 ADAM29Q9UKF5 820 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 FOXJ3Q9UPW0 622 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 ZNF705FA8MVS1 300 aaPredicted RBP10.13□□□□□ -0.79
CDH4-201ENST00000543233 M0QYG6 137 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 FCGR3AP08637 254 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 ZNF705DP0CH99 300 aaPredicted RBP10.13□□□□□ -0.79
CDH4-201ENST00000543233 ZNF705BP0CI00 300 aaPredicted RBP10.13□□□□□ -0.79
CDH4-201ENST00000543233 PGA4P0DJD7 388 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 PGA5P0DJD9 388 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 NDUFV2P19404 249 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 EPHA1P21709 976 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 SOX8P57073 446 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 AGERQ15109 404 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 SLC25A30Q5SVS4 291 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 PRAMEF8Q5VWM4 474 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 PRAMEF7Q5VXH5 474 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 FAHD2BQ6P2I3 314 aaPredicted RBP10.13□□□□□ -0.79
CDH4-201ENST00000543233 KIRREL2Q6UWL6 708 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 DRAM2Q6UX65 266 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 GALNT16Q8N428 558 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 OR56A1Q8NGH5 318 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 RLN3Q8WXF3 142 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 SAT2Q96F10 170 aaPredicted RBP10.13□□□□□ -0.79
CDH4-201ENST00000543233 FAHD2AQ96GK7 314 aa10.13□□□□□ -0.79
CDH4-201ENST00000543233 RCC1LQ96I51 464 aaKnown RBP10.13□□□□□ -0.79
CDH4-201ENST00000543233 CNN2Q99439 309 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms