RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 PDZD11Q5EBL8 140 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 YRDCQ86U90 279 aaKnown RBP11.87□□□□□ -0.51
TNC-212ENST00000542877 PATE1Q8WXA2 126 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 PPP1R3CQ9UQK1 317 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 NRG2O14511 850 aaPredicted RBP11.87□□□□□ -0.51
TNC-212ENST00000542877 TO15178 435 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 WDR1O75083 606 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 DEFA4P12838 97 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 FZD2Q14332 565 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 TMEM128Q5BJH2 165 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 LSRQ86X29 649 aaPredicted RBP11.87□□□□□ -0.51
TNC-212ENST00000542877 ARRDC1Q8N5I2 433 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 OR52B4Q8NGK2 314 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 RTN4IP1Q8WWV3 396 aaPredicted RBP11.87□□□□□ -0.51
TNC-212ENST00000542877 REEP6Q96HR9 211 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 TEX101Q9BY14 249 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 SLC17A5Q9NRA2 495 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 SERPINE3A8MV23 424 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 TBX19O60806 448 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 PIGPP57054 158 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 OR2B8PP59922 312 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 RPS23P62266 143 aaKnown RBP11.87□□□□□ -0.51
TNC-212ENST00000542877 HTRA3P83110 453 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 CDK5Q00535 292 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 SPNS2Q8IVW8 549 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 KCNE4Q8WWG9 221 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 BOD1Q96IK1 185 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 SOX7Q9BT81 388 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 CABLES2Q9BTV7 478 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 ZNF768Q9H5H4 540 aaKnown RBP11.87□□□□□ -0.51
TNC-212ENST00000542877 PHIPQ8WWQ0 1821 aa11.87□□□□□ -0.51
TNC-212ENST00000542877 ZNF816-ZNF321PA0A0X1KG74 233 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 PLRG1O43660 514 aaKnown RBP11.86□□□□□ -0.51
TNC-212ENST00000542877 COX5AP20674 150 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 SUMO3P55854 103 aaPredicted RBP11.86□□□□□ -0.51
TNC-212ENST00000542877 B4GALNT1Q00973 533 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 TOMM34Q15785 309 aaPredicted RBP11.86□□□□□ -0.51
TNC-212ENST00000542877 FAM27D1Q5T7N8 215 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 OR5AS1Q8N127 324 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 ZNF321PQ8N8H1 164 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 CLRN3Q8NCR9 226 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 CCDC74AQ96AQ1 378 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 DOK1Q99704 481 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 RAB27BO00194 218 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 PEX11BO96011 259 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 ADH4P08319 380 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 RAG2P55895 527 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 TIGITQ495A1 244 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 ZNF468Q5VIY5 522 aaPredicted RBP11.86□□□□□ -0.51
TNC-212ENST00000542877 C11orf87Q6NUJ2 197 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 BATF2Q8N1L9 274 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 THOC3Q96J01 351 aaKnown RBP11.86□□□□□ -0.51
TNC-212ENST00000542877 PYCARD-AS1I3L0S3 204 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 ZP3P21754 424 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 TRIM61Q5EBN2 209 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 TMPRSS11FQ6ZWK6 438 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 CDC20BQ86Y33 519 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 OR13D1Q8NGV5 346 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 EGLN1Q9GZT9 426 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 C12orf10Q9HB07 376 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 SLC6A13Q9NSD5 602 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 SIRT5Q9NXA8 310 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 CACFD1Q9UGQ2 172 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 GDF2Q9UK05 429 aaPredicted RBP11.86□□□□□ -0.51
TNC-212ENST00000542877 V9GYS6 101 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 AQP8O94778 261 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 CEACAM5P06731 702 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 GPR12P47775 334 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 BAMBIQ13145 260 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 ANKRD33Q7Z3H0 272 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 FBXL6Q8N531 539 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 ANKRD53Q8N9V6 530 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 RDH5Q92781 318 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 ATOH1Q92858 354 aaPredicted RBP11.86□□□□□ -0.51
TNC-212ENST00000542877 ARSGQ96EG1 525 aa11.86□□□□□ -0.51
TNC-212ENST00000542877 ARID1BQ8NFD5 2236 aaPredicted RBP11.86□□□□□ -0.51
TNC-212ENST00000542877 H0Y8G0 127 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 COMMD1Q8N668 190 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 SCCPDHQ8NBX0 429 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 SLC35D1Q9NTN3 355 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 SLC23A1Q9UHI7 598 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 SLC17A4Q9Y2C5 497 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 LAMB1P07942 1786 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 DVL1O14640 695 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 NDUFB6O95139 128 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 CRYBB2P43320 205 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 DVL1P1P54792 670 aaPredicted RBP11.85□□□□□ -0.51
TNC-212ENST00000542877 DMWDQ09019 674 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 RXFP4Q8TDU9 374 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 ORAI1Q96D31 301 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 OR8B4Q96RC9 309 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 SMIM7Q9BQ49 75 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 ZNF251Q9BRH9 671 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 CYB5R1Q9UHQ9 305 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 A0A087WUJ7 227 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 FAM166BA8MTA8 275 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 ANGPTL7O43827 346 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 CYTIPO60759 359 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 LGALS4P56470 323 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 FAM162BQ5T6X4 162 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms